RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C RPL26AP05743 127 aaKnown RBP5.28□□□□□ -1.56
RUP1YOR138C TOM6P33448 61 aa5.28□□□□□ -1.56
RUP1YOR138C RPL26BP53221 127 aaKnown RBP5.28□□□□□ -1.56
RUP1YOR138C TDA2P40045 126 aa5.26□□□□□ -1.57
RUP1YOR138C YNL162W-AQ3E7A8 72 aa5.26□□□□□ -1.57
RUP1YOR138C YCL042WP25572 119 aa5.25□□□□□ -1.57
RUP1YOR138C UBC4P15731 148 aa5.24□□□□□ -1.57
RUP1YOR138C GAT4P40569 121 aa5.24□□□□□ -1.57
RUP1YOR138C RSM19P53733 91 aaPredicted RBP5.24□□□□□ -1.57
RUP1YOR138C RRT15Q3E811 62 aa5.24□□□□□ -1.57
RUP1YOR138C SPC1P46965 94 aa5.24□□□□□ -1.57
RUP1YOR138C YDR115WQ04598 105 aa5.24□□□□□ -1.57
RUP1YOR138C FYV5P25585 152 aa5.23□□□□□ -1.57
RUP1YOR138C RSM18P40033 138 aa5.23□□□□□ -1.57
RUP1YOR138C YER187WP40102 141 aa5.23□□□□□ -1.57
RUP1YOR138C IGD1P43598 195 aa5.23□□□□□ -1.57
RUP1YOR138C YJL127C-BQ3E828 52 aa5.23□□□□□ -1.57
RUP1YOR138C YBR230W-AQ3E762 66 aa5.23□□□□□ -1.57
RUP1YOR138C YLR361C-AQ3E795 98 aa5.23□□□□□ -1.57
RUP1YOR138C ATP20Q12233 115 aa5.21□□□□□ -1.57
RUP1YOR138C Q0032Q9ZZX7 96 aa5.21□□□□□ -1.57
RUP1YOR138C ICS3P47034 131 aa5.21□□□□□ -1.58
RUP1YOR138C BET1P22804 142 aa5.2□□□□□ -1.58
RUP1YOR138C SNA2P56508 79 aa5.2□□□□□ -1.58
RUP1YOR138C YAR023CD6VPM8 179 aa5.19□□□□□ -1.58
RUP1YOR138C RTC6O14464 93 aa5.19□□□□□ -1.58
RUP1YOR138C YKL183C-AQ3E765 70 aa5.19□□□□□ -1.58
RUP1YOR138C YLL066W-BQ8TGJ7 56 aa5.19□□□□□ -1.58
RUP1YOR138C YCR050CP25630 102 aa5.18□□□□□ -1.58
RUP1YOR138C AIM4P38305 123 aaPredicted RBP5.18□□□□□ -1.58
RUP1YOR138C SFT1P43682 97 aa5.17□□□□□ -1.58
RUP1YOR138C YOL014WQ08110 124 aa5.17□□□□□ -1.58
RUP1YOR138C YDR246W-AQ3E763 66 aa5.17□□□□□ -1.58
RUP1YOR138C YNL042W-BQ3E7Z2 85 aa5.16□□□□□ -1.58
RUP1YOR138C YHR213W-BQ8TGK1 99 aa5.16□□□□□ -1.58
RUP1YOR138C YLR307C-AQ3E825 87 aa5.16□□□□□ -1.58
RUP1YOR138C YER039C-AP0CD97 72 aa5.15□□□□□ -1.58
RUP1YOR138C YRA2P36036 203 aaKnown RBP RIP-Chip data5.15□□□□□ -1.58not detected
RUP1YOR138C COX23P38824 151 aa5.14□□□□□ -1.59
RUP1YOR138C EDC2P40023 145 aaPredicted RBP5.14□□□□□ -1.59
RUP1YOR138C YOR314WQ12506 109 aa5.14□□□□□ -1.59
RUP1YOR138C NOP10Q6Q547 58 aaPredicted RBP5.14□□□□□ -1.59
RUP1YOR138C YJL133C-AQ3E7A3 74 aa5.13□□□□□ -1.59
RUP1YOR138C YLR122CQ12312 125 aa5.13□□□□□ -1.59
RUP1YOR138C YBR182C-AQ8TGU6 64 aa5.13□□□□□ -1.59
RUP1YOR138C YHR007C-AQ07074 71 aa5.11□□□□□ -1.59
RUP1YOR138C YGL041C-BQ3E750 60 aa5.11□□□□□ -1.59
RUP1YOR138C RPL36BO14455 100 aaKnown RBP5.1□□□□□ -1.59
RUP1YOR138C BSC4P53841 131 aa5.1□□□□□ -1.59
RUP1YOR138C DDR2P89113 61 aa5.09□□□□□ -1.59
RUP1YOR138C SPT4P32914 102 aaPredicted RBP5.08□□□□□ -1.6
RUP1YOR138C PEX22P39718 180 aa5.07□□□□□ -1.6
RUP1YOR138C YIL102CP40488 101 aa5.07□□□□□ -1.6
RUP1YOR138C YOR072WQ08486 104 aa5.07□□□□□ -1.6
RUP1YOR138C SBH1P52870 82 aa5.06□□□□□ -1.6
RUP1YOR138C ECM19Q06011 112 aa5.06□□□□□ -1.6
RUP1YOR138C AUA1P32450 94 aa5.05□□□□□ -1.6
RUP1YOR138C YGL193CP53097 103 aa5.04□□□□□ -1.6
RUP1YOR138C RPL36AP05745 100 aaPredicted RBP5.03□□□□□ -1.6
RUP1YOR138C GIS2P53849 153 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
RUP1YOR138C TDA8Q6B2U8 126 aa5.03□□□□□ -1.6
RUP1YOR138C YOL166W-AQ8TGJ1 51 aa5.02□□□□□ -1.61
RUP1YOR138C YEL045CP32616 141 aa5.02□□□□□ -1.61
RUP1YOR138C LIP1Q03579 150 aa5.02□□□□□ -1.61
RUP1YOR138C MIC10Q96VH5 97 aa5.02□□□□□ -1.61
RUP1YOR138C YLR162WQ06235 118 aa5.01□□□□□ -1.61
RUP1YOR138C YDR182W-AQ3E796 67 aa5.01□□□□□ -1.61
RUP1YOR138C YHL005CP38752 130 aa5□□□□□ -1.61
RUP1YOR138C YMR230W-AQ3E7B5 62 aa4.99□□□□□ -1.61
RUP1YOR138C RPS30AP0CX33 63 aaKnown RBP4.97□□□□□ -1.61
RUP1YOR138C RPS30BP0CX34 63 aaKnown RBP4.97□□□□□ -1.61
RUP1YOR138C YDR034C-AP0C289 58 aa4.97□□□□□ -1.61
RUP1YOR138C YPR195CQ06594 109 aa4.96□□□□□ -1.62
RUP1YOR138C HOT13P36078 116 aa4.96□□□□□ -1.62
RUP1YOR138C KSH1Q8TGJ3 72 aa4.96□□□□□ -1.62
RUP1YOR138C YAR064WP39563 99 aa4.94□□□□□ -1.62
RUP1YOR138C YOL013W-AP0C272 63 aaPredicted RBP4.94□□□□□ -1.62
RUP1YOR138C YBR121C-AP0C5L4 52 aa4.93□□□□□ -1.62
RUP1YOR138C KTI11Q3E840 82 aa4.93□□□□□ -1.62
RUP1YOR138C YCR043CP25361 127 aa4.92□□□□□ -1.62
RUP1YOR138C YOR381W-AQ3E804 55 aa4.92□□□□□ -1.62
RUP1YOR138C YOR268CQ08734 132 aa4.91□□□□□ -1.62
RUP1YOR138C YGR121W-AQ3E816 71 aa4.91□□□□□ -1.62
RUP1YOR138C YJL197C-AP0C5P0 93 aa4.9□□□□□ -1.62
RUP1YOR138C YBR027CP38220 110 aa4.9□□□□□ -1.63
RUP1YOR138C RPS28BP0C0X0 67 aaKnown RBP4.89□□□□□ -1.63
RUP1YOR138C RPS28AQ3E7X9 67 aaPredicted RBP4.89□□□□□ -1.63
RUP1YOR138C YLR157W-DP0CE99 70 aa4.85□□□□□ -1.63
RUP1YOR138C DYN1P36022 4092 aa4.84□□□□□ -1.63
RUP1YOR138C YGR164WP53291 111 aa4.84□□□□□ -1.63
RUP1YOR138C YPR153WQ06537 140 aa4.84□□□□□ -1.63
RUP1YOR138C YDR010CQ12426 110 aa4.84□□□□□ -1.63
RUP1YOR138C SPG1P50088 95 aa4.84□□□□□ -1.64
RUP1YOR138C YLR412C-AQ3E742 68 aa4.84□□□□□ -1.64
RUP1YOR138C YMR122CQ03879 124 aa4.83□□□□□ -1.64
RUP1YOR138C YHR125WP38831 101 aa4.82□□□□□ -1.64
RUP1YOR138C SDH6Q3E785 79 aa4.82□□□□□ -1.64
RUP1YOR138C YOL097W-AQ3E7Y9 61 aa4.81□□□□□ -1.64
RUP1YOR138C YDL012CQ12489 107 aa4.8□□□□□ -1.64
RUP1YOR138C HHF1P02309 103 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms