RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W YLR161WP0CE98 114 aa2.68□□□□□ -1.98
RRP40YOL142W FYV5P25585 152 aa2.68□□□□□ -1.98
RRP40YOL142W GLC8P41818 229 aa2.68□□□□□ -1.98
RRP40YOL142W CWC27Q02770 301 aa2.68□□□□□ -1.98
RRP40YOL142W YJL127C-BQ3E828 52 aa2.68□□□□□ -1.98
RRP40YOL142W YPR170W-BP0C5R9 85 aa2.67□□□□□ -1.98
RRP40YOL142W MSA2P36157 363 aa2.67□□□□□ -1.98
RRP40YOL142W DDR2P89113 61 aa2.67□□□□□ -1.98
RRP40YOL142W YIL102C-AQ2V2P5 75 aa2.67□□□□□ -1.98
RRP40YOL142W NHP2P32495 156 aaPredicted RBP2.66□□□□□ -1.98
RRP40YOL142W MRPL24P36525 258 aaPredicted RBP2.66□□□□□ -1.98
RRP40YOL142W YNL198CP40166 100 aa2.66□□□□□ -1.98
RRP40YOL142W HUR1P45820 110 aa2.66□□□□□ -1.98
RRP40YOL142W MPC3P53311 146 aa2.66□□□□□ -1.98
RRP40YOL142W YOR268CQ08734 132 aa2.66□□□□□ -1.98
RRP40YOL142W YGR121W-AQ3E816 71 aa2.66□□□□□ -1.98
RRP40YOL142W SPG1P50088 95 aa2.65□□□□□ -1.99
RRP40YOL142W BSC4P53841 131 aa2.64□□□□□ -1.99
RRP40YOL142W YDR010CQ12426 110 aa2.64□□□□□ -1.99
RRP40YOL142W HYP2P23301 157 aaKnown RBP2.63□□□□□ -1.99
RRP40YOL142W YGL149WP53116 101 aa2.63□□□□□ -1.99
RRP40YOL142W YHR007C-AQ07074 71 aa2.63□□□□□ -1.99
RRP40YOL142W YOR072WQ08486 104 aa2.62□□□□□ -1.99
RRP40YOL142W LSO2Q3E772 92 aaKnown RBP2.62□□□□□ -1.99
RRP40YOL142W BET1P22804 142 aa2.61□□□□□ -1.99
RRP40YOL142W SFT1P43682 97 aa2.61□□□□□ -1.99
RRP40YOL142W RPL36BO14455 100 aaKnown RBP2.6□□□□□ -1.99
RRP40YOL142W DSE2P38844 325 aa2.6□□□□□ -1.99
RRP40YOL142W YJR107C-AP0CT86 78 aa2.59□□□□□ -1.99
RRP40YOL142W YBR027CP38220 110 aa2.59□□□□□ -1.99
RRP40YOL142W YIL002W-AQ3E7Z5 69 aa2.59□□□□□ -1.99
RRP40YOL142W YFR009W-AP0C5M9 85 aa2.58□□□□□ -2
RRP40YOL142W YJL197C-AP0C5P0 93 aa2.58□□□□□ -2
RRP40YOL142W ATP18P81450 59 aa2.58□□□□□ -2
RRP40YOL142W TDA8Q6B2U8 126 aa2.58□□□□□ -2
RRP40YOL142W RSM18P40033 138 aa2.57□□□□□ -2
RRP40YOL142W YNL184CP53876 108 aa2.57□□□□□ -2
RRP40YOL142W YHR139C-AO13536 103 aa2.56□□□□□ -2
RRP40YOL142W OST2P46964 130 aa2.56□□□□□ -2
RRP40YOL142W RSM19P53733 91 aaPredicted RBP2.55□□□□□ -2
RRP40YOL142W TSC3Q3E790 80 aa2.55□□□□□ -2
RRP40YOL142W YAR1P46683 200 aa2.54□□□□□ -2
RRP40YOL142W RPA12P32529 125 aaKnown RBP2.53□□□□□ -2
RRP40YOL142W KSH1Q8TGJ3 72 aa2.53□□□□□ -2
RRP40YOL142W YHR213W-BQ8TGK1 99 aa2.53□□□□□ -2
RRP40YOL142W ICS3P47034 131 aa2.52□□□□□ -2.01
RRP40YOL142W SHH4Q06236 168 aa2.52□□□□□ -2.01
RRP40YOL142W EMC6Q12431 108 aa2.52□□□□□ -2.01
RRP40YOL142W YDR381C-AQ3E6R5 114 aa2.52□□□□□ -2.01
RRP40YOL142W YJL133C-AQ3E7A3 74 aa2.52□□□□□ -2.01
RRP40YOL142W COX23P38824 151 aa2.51□□□□□ -2.01
RRP40YOL142W EDC1P53080 175 aaPredicted RBP2.51□□□□□ -2.01
RRP40YOL142W YLR162WQ06235 118 aa2.51□□□□□ -2.01
RRP40YOL142W KTI11Q3E840 82 aa2.51□□□□□ -2.01
RRP40YOL142W YOL014WQ08110 124 aa2.5□□□□□ -2.01
RRP40YOL142W YHR086W-AQ3E746 53 aa2.5□□□□□ -2.01
RRP40YOL142W MIC10Q96VH5 97 aa2.5□□□□□ -2.01
RRP40YOL142W PBI2P0CT04 75 aaKnown RBP2.49□□□□□ -2.01
RRP40YOL142W YHL005CP38752 130 aa2.49□□□□□ -2.01
RRP40YOL142W YOL097W-AQ3E7Y9 61 aa2.49□□□□□ -2.01
RRP40YOL142W YLR157W-DP0CE99 70 aa2.48□□□□□ -2.01
RRP40YOL142W CMC4Q3E7A9 73 aa2.47□□□□□ -2.01
RRP40YOL142W YCR085WP25650 117 aa2.46□□□□□ -2.02
RRP40YOL142W YHL018WP38744 120 aaPredicted RBP2.46□□□□□ -2.02
RRP40YOL142W SKI6P46948 246 aaPredicted RBP2.45□□□□□ -2.02
RRP40YOL142W RPL38P49167 78 aaKnown RBP2.45□□□□□ -2.02
RRP40YOL142W TDA2P40045 126 aa2.44□□□□□ -2.02
RRP40YOL142W YNL122CP53921 115 aaPredicted RBP2.44□□□□□ -2.02
RRP40YOL142W RAD6P06104 172 aa2.43□□□□□ -2.02
RRP40YOL142W ATX1P38636 73 aa2.43□□□□□ -2.02
RRP40YOL142W RPL37BP51402 88 aaKnown RBP2.43□□□□□ -2.02
RRP40YOL142W COF1Q03048 143 aaKnown RBP2.43□□□□□ -2.02
RRP40YOL142W YBL008W-AQ3E821 79 aa2.43□□□□□ -2.02
RRP40YOL142W YCR050CP25630 102 aa2.42□□□□□ -2.02
RRP40YOL142W YHR073W-AP0C5N7 58 aa2.41□□□□□ -2.02
RRP40YOL142W COX7P10174 60 aa2.41□□□□□ -2.02
RRP40YOL142W INO4P13902 151 aa2.41□□□□□ -2.02
RRP40YOL142W YHL042WP38729 150 aa2.41□□□□□ -2.02
RRP40YOL142W YGL034CP53186 121 aa2.41□□□□□ -2.02
RRP40YOL142W ATP20Q12233 115 aa2.41□□□□□ -2.02
RRP40YOL142W YAR064WP39563 99 aa2.4□□□□□ -2.03
RRP40YOL142W RPL36AP05745 100 aaPredicted RBP2.38□□□□□ -2.03
RRP40YOL142W YLR285C-AQ3E771 56 aa2.38□□□□□ -2.03
RRP40YOL142W YFL041W-AQ3E817 63 aa2.38□□□□□ -2.03
RRP40YOL142W YSY6P38374 65 aa2.37□□□□□ -2.03
RRP40YOL142W YOR304C-AO14468 76 aa2.36□□□□□ -2.03
RRP40YOL142W YER187WP40102 141 aa2.36□□□□□ -2.03
RRP40YOL142W SLO1Q3E784 85 aa2.36□□□□□ -2.03
RRP40YOL142W YGR164WP53291 111 aa2.35□□□□□ -2.03
RRP40YOL142W YPR153WQ06537 140 aa2.35□□□□□ -2.03
RRP40YOL142W YLR361C-AQ3E795 98 aa2.35□□□□□ -2.03
RRP40YOL142W YOR316C-AQ3E806 69 aa2.35□□□□□ -2.03
RRP40YOL142W YHR032W-AP0C5N6 59 aa2.34□□□□□ -2.03
RRP40YOL142W YFL065CP43539 102 aa2.33□□□□□ -2.04
RRP40YOL142W YPR203WQ08994 102 aa2.33□□□□□ -2.04
RRP40YOL142W YHR125WP38831 101 aa2.31□□□□□ -2.04
RRP40YOL142W YKL183C-AQ3E765 70 aa2.31□□□□□ -2.04
RRP40YOL142W YOL013W-AP0C272 63 aaPredicted RBP2.29□□□□□ -2.04
RRP40YOL142W YJR128WP47162 119 aa2.29□□□□□ -2.04
RRP40YOL142W LIP1Q03579 150 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms