RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W ECM12O13529 151 aa3.94□□□□□ -1.78
PSH1YOL054W SGF11Q03067 99 aa3.94□□□□□ -1.78
PSH1YOL054W YMR320WQ04897 101 aa3.94□□□□□ -1.78
PSH1YOL054W YLR285C-AQ3E771 56 aa3.94□□□□□ -1.78
PSH1YOL054W RPL33AP05744 107 aaKnown RBP3.93□□□□□ -1.78
PSH1YOL054W RPL33BP41056 107 aaKnown RBP3.93□□□□□ -1.78
PSH1YOL054W YFL019CP43576 117 aa3.93□□□□□ -1.78
PSH1YOL054W SMD1Q02260 146 aaPredicted RBP3.93□□□□□ -1.78
PSH1YOL054W TSC3Q3E790 80 aa3.93□□□□□ -1.78
PSH1YOL054W YGR035W-AQ45U48 73 aa3.93□□□□□ -1.78
PSH1YOL054W RPL26AP05743 127 aaKnown RBP3.92□□□□□ -1.78
PSH1YOL054W YBL039W-BP0C268 59 aa3.92□□□□□ -1.78
PSH1YOL054W YFR009W-AP0C5M9 85 aa3.92□□□□□ -1.78
PSH1YOL054W AQY2P0CD90 149 aa3.92□□□□□ -1.78
PSH1YOL054W UBC4P15731 148 aa3.92□□□□□ -1.78
PSH1YOL054W RPL26BP53221 127 aaKnown RBP3.92□□□□□ -1.78
PSH1YOL054W MDN1Q12019 4910 aaKnown RBP3.91□□□□□ -1.78
PSH1YOL054W YLR156WP0CE96 114 aa3.91□□□□□ -1.78
PSH1YOL054W YLR159WP0CE97 114 aa3.91□□□□□ -1.78
PSH1YOL054W YLR161WP0CE98 114 aa3.91□□□□□ -1.78
PSH1YOL054W YBL081WP38180 368 aaKnown RBP3.91□□□□□ -1.78
PSH1YOL054W YLR361C-AQ3E795 98 aa3.91□□□□□ -1.78
PSH1YOL054W SFT1P43682 97 aa3.9□□□□□ -1.79
PSH1YOL054W SPC1P46965 94 aa3.9□□□□□ -1.79
PSH1YOL054W EDC1P53080 175 aaPredicted RBP3.9□□□□□ -1.79
PSH1YOL054W FYV5P25585 152 aa3.89□□□□□ -1.79
PSH1YOL054W SPT4P32914 102 aaPredicted RBP3.89□□□□□ -1.79
PSH1YOL054W YAL064WP39711 94 aa3.89□□□□□ -1.79
PSH1YOL054W YER187WP40102 141 aa3.89□□□□□ -1.79
PSH1YOL054W YKL183C-AQ3E765 70 aa3.89□□□□□ -1.79
PSH1YOL054W TDA2P40045 126 aa3.88□□□□□ -1.79
PSH1YOL054W YDR246W-AQ3E763 66 aa3.88□□□□□ -1.79
PSH1YOL054W RPL38P49167 78 aaKnown RBP3.87□□□□□ -1.79
PSH1YOL054W YBR230W-AQ3E762 66 aa3.87□□□□□ -1.79
PSH1YOL054W YLR307C-AQ3E825 87 aa3.87□□□□□ -1.79
PSH1YOL054W YLL066W-BQ8TGJ7 56 aa3.87□□□□□ -1.79
PSH1YOL054W RSM18P40033 138 aa3.86□□□□□ -1.79
PSH1YOL054W ATP20Q12233 115 aa3.86□□□□□ -1.79
PSH1YOL054W YJL127C-BQ3E828 52 aa3.86□□□□□ -1.79
PSH1YOL054W YCR050CP25630 102 aa3.85□□□□□ -1.79
PSH1YOL054W YRA2P36036 203 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
PSH1YOL054W ICS3P47034 131 aa3.85□□□□□ -1.79
PSH1YOL054W YNL042W-BQ3E7Z2 85 aa3.85□□□□□ -1.79
PSH1YOL054W RTC6O14464 93 aa3.84□□□□□ -1.79
PSH1YOL054W YER039C-AP0CD97 72 aa3.84□□□□□ -1.79
PSH1YOL054W AIM4P38305 123 aaPredicted RBP3.84□□□□□ -1.79
PSH1YOL054W COX23P38824 151 aa3.84□□□□□ -1.79
PSH1YOL054W BET1P22804 142 aa3.83□□□□□ -1.8
PSH1YOL054W EDC2P40023 145 aaPredicted RBP3.83□□□□□ -1.8
PSH1YOL054W YOR314WQ12506 109 aa3.83□□□□□ -1.8
PSH1YOL054W Q0032Q9ZZX7 96 aa3.82□□□□□ -1.8
PSH1YOL054W YDR182W-AQ3E796 67 aa3.81□□□□□ -1.8
PSH1YOL054W YHR213W-BQ8TGK1 99 aa3.81□□□□□ -1.8
PSH1YOL054W SBH1P52870 82 aa3.8□□□□□ -1.8
PSH1YOL054W YOL014WQ08110 124 aa3.8□□□□□ -1.8
PSH1YOL054W YGL041C-BQ3E750 60 aa3.8□□□□□ -1.8
PSH1YOL054W RRT15Q3E811 62 aa3.8□□□□□ -1.8
PSH1YOL054W NOP10Q6Q547 58 aaPredicted RBP3.8□□□□□ -1.8
PSH1YOL054W YAR023CD6VPM8 179 aa3.79□□□□□ -1.8
PSH1YOL054W YAL067W-AQ8TGK6 75 aa3.79□□□□□ -1.8
PSH1YOL054W SNA2P56508 79 aa3.78□□□□□ -1.8
PSH1YOL054W YJL133C-AQ3E7A3 74 aa3.78□□□□□ -1.8
PSH1YOL054W TDA8Q6B2U8 126 aa3.78□□□□□ -1.8
PSH1YOL054W RPL36BO14455 100 aaKnown RBP3.77□□□□□ -1.81
PSH1YOL054W RPL36AP05745 100 aaPredicted RBP3.77□□□□□ -1.81
PSH1YOL054W YOL166W-AQ8TGJ1 51 aa3.77□□□□□ -1.81
PSH1YOL054W YGL193CP53097 103 aa3.76□□□□□ -1.81
PSH1YOL054W ECM19Q06011 112 aa3.76□□□□□ -1.81
PSH1YOL054W KTI11Q3E840 82 aa3.76□□□□□ -1.81
PSH1YOL054W DDR2P89113 61 aa3.75□□□□□ -1.81
PSH1YOL054W YLR162WQ06235 118 aa3.74□□□□□ -1.81
PSH1YOL054W YOR072WQ08486 104 aa3.74□□□□□ -1.81
PSH1YOL054W AUA1P32450 94 aa3.73□□□□□ -1.81
PSH1YOL054W BSC4P53841 131 aa3.73□□□□□ -1.81
PSH1YOL054W GIS2P53849 153 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81 RIP-Chip
PSH1YOL054W YHR007C-AQ07074 71 aa3.73□□□□□ -1.81
PSH1YOL054W MIC10Q96VH5 97 aa3.72□□□□□ -1.81
PSH1YOL054W YGR164WP53291 111 aa3.71□□□□□ -1.82
PSH1YOL054W KSH1Q8TGJ3 72 aa3.71□□□□□ -1.82
PSH1YOL054W YBR121C-AP0C5L4 52 aa3.7□□□□□ -1.82
PSH1YOL054W YHL005CP38752 130 aa3.7□□□□□ -1.82
PSH1YOL054W LIP1Q03579 150 aa3.7□□□□□ -1.82
PSH1YOL054W YLR412C-AQ3E742 68 aa3.7□□□□□ -1.82
PSH1YOL054W RPS28BP0C0X0 67 aaKnown RBP3.69□□□□□ -1.82
PSH1YOL054W YOL013W-AP0C272 63 aaPredicted RBP3.69□□□□□ -1.82
PSH1YOL054W RPS28AQ3E7X9 67 aaPredicted RBP3.69□□□□□ -1.82
PSH1YOL054W YJL197C-AP0C5P0 93 aa3.68□□□□□ -1.82
PSH1YOL054W RPS30AP0CX33 63 aaKnown RBP3.67□□□□□ -1.82
PSH1YOL054W RPS30BP0CX34 63 aaKnown RBP3.67□□□□□ -1.82
PSH1YOL054W YIL102CP40488 101 aa3.67□□□□□ -1.82
PSH1YOL054W YGR121W-AQ3E816 71 aa3.67□□□□□ -1.82
PSH1YOL054W YAR064WP39563 99 aa3.65□□□□□ -1.83
PSH1YOL054W YKL065W-AQ2V2P2 73 aa3.64□□□□□ -1.83
PSH1YOL054W YDR034C-AP0C289 58 aa3.63□□□□□ -1.83
PSH1YOL054W SPG1P50088 95 aa3.62□□□□□ -1.83
PSH1YOL054W YOR381W-AQ3E804 55 aa3.62□□□□□ -1.83
PSH1YOL054W YHR125WP38831 101 aa3.6□□□□□ -1.83
PSH1YOL054W YOL097W-AQ3E7Y9 61 aa3.6□□□□□ -1.83
PSH1YOL054W YMR122CQ03879 124 aa3.59□□□□□ -1.83
PSH1YOL054W YOR268CQ08734 132 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms