RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeastyeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP5YMR229C YNL277W-AQ3E7Z0 62 aa2.52□□□□□ -2.01
RRP5YMR229C YMR122W-AQ3E842 84 aa2.52□□□□□ -2.01
RRP5YMR229C CCH1P50077 2039 aa2.52□□□□□ -2.01
RRP5YMR229C YGR025WP53216 100 aa2.52□□□□□ -2.01
RRP5YMR229C YDL241WQ07738 123 aa2.52□□□□□ -2.01
RRP5YMR229C SPT4P32914 102 aaPredicted RBP2.51□□□□□ -2.01
RRP5YMR229C COX14P39103 70 aa2.51□□□□□ -2.01
RRP5YMR229C RSM19P53733 91 aaPredicted RBP2.51□□□□□ -2.01
RRP5YMR229C CYR1P08678 2026 aaKnown RBP2.51□□□□□ -2.01
RRP5YMR229C YPL038W-AQ3E7B4 63 aa2.51□□□□□ -2.01
RRP5YMR229C YOR381W-AQ3E804 55 aa2.51□□□□□ -2.01
RRP5YMR229C GLT1Q12680 2145 aaKnown RBP2.51□□□□□ -2.01
RRP5YMR229C ICY1Q04329 127 aa2.51□□□□□ -2.01
RRP5YMR229C YDR381C-AQ3E6R5 114 aa2.51□□□□□ -2.01
RRP5YMR229C EDC2P40023 145 aaPredicted RBP2.5□□□□□ -2.01
RRP5YMR229C DDR2P89113 61 aa2.5□□□□□ -2.01
RRP5YMR229C MRP10O75012 95 aa2.5□□□□□ -2.01
RRP5YMR229C FYV5P25585 152 aa2.5□□□□□ -2.01
RRP5YMR229C PRP8P33334 2413 aaKnown RBP2.5□□□□□ -2.01
RRP5YMR229C YLR422WQ06409 1932 aa2.5□□□□□ -2.01
RRP5YMR229C WWM1P43582 211 aaKnown RBP2.49□□□□□ -2.01
RRP5YMR229C HUB1Q6Q546 73 aa2.49□□□□□ -2.01
RRP5YMR229C UBC5P15732 148 aa2.49□□□□□ -2.01
RRP5YMR229C YJL133C-AQ3E7A3 74 aa2.49□□□□□ -2.01
RRP5YMR229C TOR2P32600 2474 aaKnown RBP2.48□□□□□ -2.01
RRP5YMR229C RPL36BO14455 100 aaKnown RBP2.48□□□□□ -2.01
RRP5YMR229C YBL081WP38180 368 aaKnown RBP2.48□□□□□ -2.01
RRP5YMR229C SDH6Q3E785 79 aa2.48□□□□□ -2.01
RRP5YMR229C YHL005CP38752 130 aa2.48□□□□□ -2.01
RRP5YMR229C ICS3P47034 131 aa2.48□□□□□ -2.01
RRP5YMR229C SPG1P50088 95 aa2.47□□□□□ -2.01
RRP5YMR229C YDR119W-AQ2V2P9 66 aa2.47□□□□□ -2.01
RRP5YMR229C YCR095W-AQ3E787 52 aa2.47□□□□□ -2.01
RRP5YMR229C YHR007C-AQ07074 71 aa2.47□□□□□ -2.01
RRP5YMR229C YHR213W-BQ8TGK1 99 aa2.47□□□□□ -2.01
RRP5YMR229C BSC4P53841 131 aa2.46□□□□□ -2.02
RRP5YMR229C YOR072WQ08486 104 aa2.46□□□□□ -2.02
RRP5YMR229C OST5Q92316 86 aa2.46□□□□□ -2.02
RRP5YMR229C YDL022C-AP0C5L6 82 aa2.46□□□□□ -2.02
RRP5YMR229C LIP1Q03579 150 aa2.46□□□□□ -2.02
RRP5YMR229C MSA2P36157 363 aa2.46□□□□□ -2.02
RRP5YMR229C RPC10P40422 70 aa2.46□□□□□ -2.02
RRP5YMR229C YNL042W-BQ3E7Z2 85 aa2.46□□□□□ -2.02
RRP5YMR229C YJL197C-AP0C5P0 93 aa2.45□□□□□ -2.02
RRP5YMR229C MRPS12P53732 153 aa2.45□□□□□ -2.02
RRP5YMR229C YAL065CO13511 128 aa2.45□□□□□ -2.02
RRP5YMR229C RPL36AP05745 100 aaPredicted RBP2.45□□□□□ -2.02
RRP5YMR229C EDC1P53080 175 aaPredicted RBP2.45□□□□□ -2.02
RRP5YMR229C HOT13P36078 116 aa2.44□□□□□ -2.02
RRP5YMR229C ECM19Q06011 112 aa2.44□□□□□ -2.02
RRP5YMR229C CMC4Q3E7A9 73 aa2.44□□□□□ -2.02
RRP5YMR229C YBR230W-AQ3E762 66 aa2.44□□□□□ -2.02
RRP5YMR229C RRT15Q3E811 62 aa2.44□□□□□ -2.02
RRP5YMR229C RPS30AP0CX33 63 aaKnown RBP2.43□□□□□ -2.02
RRP5YMR229C RPS30BP0CX34 63 aaKnown RBP2.43□□□□□ -2.02
RRP5YMR229C SAP30P38429 201 aa2.43□□□□□ -2.02
RRP5YMR229C COX23P38824 151 aa2.42□□□□□ -2.02
RRP5YMR229C YFL067WP43537 175 aa2.42□□□□□ -2.02
RRP5YMR229C TAR1Q8TGM6 124 aa2.42□□□□□ -2.02
RRP5YMR229C NOP10Q6Q547 58 aaPredicted RBP2.42□□□□□ -2.02
RRP5YMR229C YCR043CP25361 127 aa2.42□□□□□ -2.02
RRP5YMR229C RPL33AP05744 107 aaKnown RBP2.42□□□□□ -2.02
RRP5YMR229C RPL33BP41056 107 aaKnown RBP2.42□□□□□ -2.02
RRP5YMR229C YKL065W-AQ2V2P2 73 aa2.42□□□□□ -2.02
RRP5YMR229C RPL29P05747 59 aaPredicted RBP2.41□□□□□ -2.02
RRP5YMR229C YBR219CP38317 127 aa2.41□□□□□ -2.02
RRP5YMR229C YFR009W-AP0C5M9 85 aa2.41□□□□□ -2.02
RRP5YMR229C YBR201C-AQ2V2Q3 67 aa2.4□□□□□ -2.02
RRP5YMR229C YAR064WP39563 99 aa2.4□□□□□ -2.03
RRP5YMR229C YOR376W-AQ3E805 51 aa2.4□□□□□ -2.03
RRP5YMR229C MEC1P38111 2368 aa2.39□□□□□ -2.03
RRP5YMR229C YDR182W-AQ3E796 67 aa2.39□□□□□ -2.03
RRP5YMR229C TDA8Q6B2U8 126 aa2.39□□□□□ -2.03
RRP5YMR229C YBL008W-AQ3E821 79 aa2.39□□□□□ -2.03
RRP5YMR229C YGR164WP53291 111 aa2.38□□□□□ -2.03
RRP5YMR229C YOR268CQ08734 132 aa2.38□□□□□ -2.03
RRP5YMR229C FMP27Q06179 2628 aa2.38□□□□□ -2.03
RRP5YMR229C YFR032C-BQ8TGU2 87 aa2.38□□□□□ -2.03
RRP5YMR229C YMR001C-AQ8TGS9 76 aa2.38□□□□□ -2.03
RRP5YMR229C GAT4P40569 121 aa2.38□□□□□ -2.03
RRP5YMR229C GIS2P53849 153 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
RRP5YMR229C YML054C-AQ3E809 52 aa2.37□□□□□ -2.03
RRP5YMR229C YGR121W-AQ3E816 71 aa2.37□□□□□ -2.03
RRP5YMR229C MIC10Q96VH5 97 aa2.37□□□□□ -2.03
RRP5YMR229C YMR122CQ03879 124 aa2.37□□□□□ -2.03
RRP5YMR229C YPR153WQ06537 140 aa2.37□□□□□ -2.03
RRP5YMR229C OLI1P61829 76 aa2.37□□□□□ -2.03
RRP5YMR229C YOL097W-AQ3E7Y9 61 aa2.37□□□□□ -2.03
RRP5YMR229C YIL156W-BQ2V2P4 73 aa2.36□□□□□ -2.03
RRP5YMR229C YNL162W-AQ3E7A8 72 aa2.36□□□□□ -2.03
RRP5YMR229C YLR162WQ06235 118 aa2.35□□□□□ -2.03
RRP5YMR229C UTP20P35194 2493 aaKnown RBP2.35□□□□□ -2.03
RRP5YMR229C COX8P04039 78 aa2.35□□□□□ -2.03
RRP5YMR229C RDS3Q06835 107 aaPredicted RBP2.35□□□□□ -2.03
RRP5YMR229C IGD1P43598 195 aa2.35□□□□□ -2.03
RRP5YMR229C YLR307C-AQ3E825 87 aa2.35□□□□□ -2.03
RRP5YMR229C YDR010CQ12426 110 aa2.35□□□□□ -2.03
RRP5YMR229C Q0017Q9ZZX8 53 aa2.35□□□□□ -2.03
RRP5YMR229C YOL013W-AP0C272 63 aaPredicted RBP2.34□□□□□ -2.03
RRP5YMR229C YML100W-AQ8TGT0 57 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms