RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YER181CP40097 107 aa4.55□□□□□ -1.68
NUP53YMR153W HUR1P45820 110 aa4.54□□□□□ -1.68
NUP53YMR153W YLR363W-AQ3E747 85 aa4.54□□□□□ -1.68
NUP53YMR153W YAL063C-AQ3E791 96 aa4.54□□□□□ -1.68
NUP53YMR153W PAI3P01094 68 aa4.53□□□□□ -1.68
NUP53YMR153W SFT1P43682 97 aa4.53□□□□□ -1.68
NUP53YMR153W MSA2P36157 363 aa4.52□□□□□ -1.69
NUP53YMR153W YNL184CP53876 108 aa4.52□□□□□ -1.69
NUP53YMR153W YHL018WP38744 120 aaPredicted RBP4.51□□□□□ -1.69
NUP53YMR153W SAE3P89114 91 aa4.5□□□□□ -1.69
NUP53YMR153W LSM6Q06406 86 aaKnown RBP4.5□□□□□ -1.69
NUP53YMR153W POP7P38291 140 aa4.49□□□□□ -1.69
NUP53YMR153W YHL005CP38752 130 aa4.48□□□□□ -1.69
NUP53YMR153W OST2P46964 130 aa4.48□□□□□ -1.69
NUP53YMR153W YAR1P46683 200 aa4.47□□□□□ -1.69
NUP53YMR153W LSM8P47093 109 aaKnown RBP4.47□□□□□ -1.69
NUP53YMR153W YDL085C-AQ3E7B7 68 aaKnown RBP4.47□□□□□ -1.69
NUP53YMR153W TSC3Q3E790 80 aa4.46□□□□□ -1.7
NUP53YMR153W CWC27Q02770 301 aa4.45□□□□□ -1.7
NUP53YMR153W RSM18P40033 138 aa4.44□□□□□ -1.7
NUP53YMR153W YBR182C-AQ8TGU6 64 aa4.44□□□□□ -1.7
NUP53YMR153W YLR296WQ05898 108 aa4.43□□□□□ -1.7
NUP53YMR153W YLR157W-DP0CE99 70 aa4.42□□□□□ -1.7
NUP53YMR153W DSE2P38844 325 aa4.42□□□□□ -1.7
NUP53YMR153W UIP3P39547 235 aa4.42□□□□□ -1.7
NUP53YMR153W YJR107C-AP0CT86 78 aa4.4□□□□□ -1.7
NUP53YMR153W COX7P10174 60 aa4.4□□□□□ -1.7
NUP53YMR153W TDA8Q6B2U8 126 aa4.4□□□□□ -1.7
NUP53YMR153W GLC8P41818 229 aa4.38□□□□□ -1.71
NUP53YMR153W RPL37BP51402 88 aaKnown RBP4.38□□□□□ -1.71
NUP53YMR153W YNL122CP53921 115 aaPredicted RBP4.38□□□□□ -1.71
NUP53YMR153W RSM19P53733 91 aaPredicted RBP4.38□□□□□ -1.71
NUP53YMR153W ATP18P81450 59 aa4.38□□□□□ -1.71
NUP53YMR153W YOL097W-AQ3E7Y9 61 aa4.38□□□□□ -1.71
NUP53YMR153W YHR213W-BQ8TGK1 99 aa4.37□□□□□ -1.71
NUP53YMR153W YEL045CP32616 141 aa4.36□□□□□ -1.71
NUP53YMR153W YIL102C-AQ2V2P5 75 aa4.36□□□□□ -1.71
NUP53YMR153W RPP2AP05319 106 aaKnown RBP4.35□□□□□ -1.71
NUP53YMR153W YFR009W-AP0C5M9 85 aa4.35□□□□□ -1.71
NUP53YMR153W YJL133C-AQ3E7A3 74 aa4.34□□□□□ -1.71
NUP53YMR153W YLR162WQ06235 118 aa4.33□□□□□ -1.72
NUP53YMR153W ECM19Q06011 112 aa4.32□□□□□ -1.72
NUP53YMR153W MIC10Q96VH5 97 aa4.32□□□□□ -1.72
NUP53YMR153W ICS3P47034 131 aa4.31□□□□□ -1.72
NUP53YMR153W YNL198CP40166 100 aa4.29□□□□□ -1.72
NUP53YMR153W YCR043CP25361 127 aa4.27□□□□□ -1.73
NUP53YMR153W SHH4Q06236 168 aa4.26□□□□□ -1.73
NUP53YMR153W COX23P38824 151 aa4.25□□□□□ -1.73
NUP53YMR153W COF1Q03048 143 aaKnown RBP4.24□□□□□ -1.73
NUP53YMR153W YPR170W-BP0C5R9 85 aa4.22□□□□□ -1.73
NUP53YMR153W RPL38P49167 78 aaKnown RBP4.22□□□□□ -1.73
NUP53YMR153W YDR381C-AQ3E6R5 114 aa4.22□□□□□ -1.73
NUP53YMR153W ISD11Q6Q560 94 aa4.21□□□□□ -1.73
NUP53YMR153W TDA2P40045 126 aa4.21□□□□□ -1.74
NUP53YMR153W YER187WP40102 141 aa4.21□□□□□ -1.74
NUP53YMR153W EDC1P53080 175 aaPredicted RBP4.21□□□□□ -1.74
NUP53YMR153W YOL014WQ08110 124 aa4.21□□□□□ -1.74
NUP53YMR153W PBI2P0CT04 75 aaKnown RBP4.18□□□□□ -1.74
NUP53YMR153W YLR361C-AQ3E795 98 aa4.17□□□□□ -1.74
NUP53YMR153W YOR304C-AO14468 76 aa4.15□□□□□ -1.74
NUP53YMR153W YHR073W-AP0C5N7 58 aa4.15□□□□□ -1.74
NUP53YMR153W RPA12P32529 125 aaKnown RBP4.15□□□□□ -1.74
NUP53YMR153W YHL042WP38729 150 aa4.15□□□□□ -1.74
NUP53YMR153W FYV12Q08559 129 aa4.12□□□□□ -1.75
NUP53YMR153W Q0017Q9ZZX8 53 aa4.12□□□□□ -1.75
NUP53YMR153W RPL36AP05745 100 aaPredicted RBP4.12□□□□□ -1.75
NUP53YMR153W YDL012CQ12489 107 aa4.12□□□□□ -1.75
NUP53YMR153W YAR064WP39563 99 aa4.11□□□□□ -1.75
NUP53YMR153W ATP20Q12233 115 aa4.1□□□□□ -1.75
NUP53YMR153W YCR050CP25630 102 aa4.09□□□□□ -1.75
NUP53YMR153W RAD6P06104 172 aa4.08□□□□□ -1.76
NUP53YMR153W YOR316C-AQ3E806 69 aa4.06□□□□□ -1.76
NUP53YMR153W SKI6P46948 246 aaPredicted RBP4.05□□□□□ -1.76
NUP53YMR153W YPR153WQ06537 140 aa4.05□□□□□ -1.76
NUP53YMR153W YER175W-AQ8TGU4 54 aa4.05□□□□□ -1.76
NUP53YMR153W YJR128WP47162 119 aa4.04□□□□□ -1.76
NUP53YMR153W YGR164WP53291 111 aa4.04□□□□□ -1.76
NUP53YMR153W LSO2Q3E772 92 aaKnown RBP4.04□□□□□ -1.76
NUP53YMR153W YCR085WP25650 117 aa4.04□□□□□ -1.76
NUP53YMR153W YJL144WP47009 104 aa4.01□□□□□ -1.77
NUP53YMR153W YJL009WP47078 108 aa4.01□□□□□ -1.77
NUP53YMR153W ATX1P38636 73 aa3.98□□□□□ -1.77
NUP53YMR153W YPL080CQ02826 108 aa3.98□□□□□ -1.77
NUP53YMR153W EMC6Q12431 108 aa3.98□□□□□ -1.77
NUP53YMR153W HHF1P02309 103 aaKnown RBP3.96□□□□□ -1.77
NUP53YMR153W YDR210WQ03482 75 aa3.96□□□□□ -1.77
NUP53YMR153W YLR285C-AQ3E771 56 aa3.96□□□□□ -1.77
NUP53YMR153W YGL034CP53186 121 aa3.95□□□□□ -1.78
NUP53YMR153W INO4P13902 151 aa3.94□□□□□ -1.78
NUP53YMR153W YSY6P38374 65 aa3.9□□□□□ -1.78
NUP53YMR153W YGR039WP53225 103 aa3.9□□□□□ -1.78
NUP53YMR153W LIP1Q03579 150 aa3.89□□□□□ -1.79
NUP53YMR153W YIL102CP40488 101 aa3.87□□□□□ -1.79
NUP53YMR153W YFL041W-AQ3E817 63 aa3.87□□□□□ -1.79
NUP53YMR153W YKL183C-AQ3E765 70 aa3.86□□□□□ -1.79
NUP53YMR153W YIL002W-AQ3E7Z5 69 aa3.84□□□□□ -1.79
NUP53YMR153W YOL013W-AP0C272 63 aaPredicted RBP3.83□□□□□ -1.8
NUP53YMR153W COX8P04039 78 aa3.82□□□□□ -1.8
NUP53YMR153W YBL008W-AQ3E821 79 aa3.81□□□□□ -1.8
NUP53YMR153W YGR146C-AQ8TGT9 53 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms