RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YGR121W-AQ3E816 71 aa8.82□□□□□ -1
BDF1YLR399C YOR381W-AQ3E804 55 aa8.81□□□□□ -1
BDF1YLR399C YCR041WP37265 110 aa8.81□□□□□ -1
BDF1YLR399C GCN1P33892 2672 aaKnown RBP8.77□□□□□ -1
BDF1YLR399C YDL241WQ07738 123 aa8.77□□□□□ -1
BDF1YLR399C AIR2Q12476 344 aaKnown RBP8.77□□□□□ -1
BDF1YLR399C YCR001WP25347 104 aa8.77□□□□□ -1.01
BDF1YLR399C RPS30AP0CX33 63 aaKnown RBP8.76□□□□□ -1.01
BDF1YLR399C RPS30BP0CX34 63 aaKnown RBP8.76□□□□□ -1.01
BDF1YLR399C FYV5P25585 152 aa8.75□□□□□ -1.01
BDF1YLR399C MIC10Q96VH5 97 aa8.75□□□□□ -1.01
BDF1YLR399C COX23P38824 151 aa8.74□□□□□ -1.01
BDF1YLR399C AQY2P0CD90 149 aa8.74□□□□□ -1.01
BDF1YLR399C YGR240C-AQ3E786 66 aa8.74□□□□□ -1.01
BDF1YLR399C YHR213W-BQ8TGK1 99 aa8.74□□□□□ -1.01
BDF1YLR399C YPL278CQ08990 100 aa8.73□□□□□ -1.01
BDF1YLR399C YBL081WP38180 368 aaKnown RBP8.73□□□□□ -1.01
BDF1YLR399C SPO24Q3E752 67 aa8.73□□□□□ -1.01
BDF1YLR399C YBR126W-AQ8TGU7 68 aa8.73□□□□□ -1.01
BDF1YLR399C EDC2P40023 145 aaPredicted RBP8.71□□□□□ -1.01
BDF1YLR399C YDR274CP87283 123 aa8.71□□□□□ -1.01
BDF1YLR399C YBR230W-AQ3E762 66 aa8.71□□□□□ -1.01
BDF1YLR399C YJL127C-BQ3E828 52 aa8.71□□□□□ -1.01
BDF1YLR399C YBL039W-BP0C268 59 aa8.71□□□□□ -1.02
BDF1YLR399C YAL064WP39711 94 aa8.71□□□□□ -1.02
BDF1YLR399C RPC10P40422 70 aa8.71□□□□□ -1.02
BDF1YLR399C YIL102CP40488 101 aa8.71□□□□□ -1.02
BDF1YLR399C YPR010C-AA5Z2X5 72 aa8.69□□□□□ -1.02
BDF1YLR399C SPT4P32914 102 aaPredicted RBP8.69□□□□□ -1.02
BDF1YLR399C YGR035W-AQ45U48 73 aa8.69□□□□□ -1.02
BDF1YLR399C LIP1Q03579 150 aa8.68□□□□□ -1.02
BDF1YLR399C YHR212W-AP0CX91 67 aa8.67□□□□□ -1.02
BDF1YLR399C YMR122CQ03879 124 aa8.67□□□□□ -1.02
BDF1YLR399C IGD1P43598 195 aa8.66□□□□□ -1.02
BDF1YLR399C YJL133C-AQ3E7A3 74 aa8.66□□□□□ -1.02
BDF1YLR399C RDS3Q06835 107 aaPredicted RBP8.65□□□□□ -1.03
BDF1YLR399C HHF1P02309 103 aaKnown RBP8.64□□□□□ -1.03
BDF1YLR399C Q0297Q9ZZV8 51 aa8.64□□□□□ -1.03
BDF1YLR399C TOR2P32600 2474 aaKnown RBP8.63□□□□□ -1.03
BDF1YLR399C YBR056W-AI2HB52 66 aa8.63□□□□□ -1.03
BDF1YLR399C SPC1P46965 94 aa8.63□□□□□ -1.03
BDF1YLR399C YAR023CD6VPM8 179 aa8.61□□□□□ -1.03
BDF1YLR399C YKL065W-AQ2V2P2 73 aa8.61□□□□□ -1.03
BDF1YLR399C OST5Q92316 86 aa8.58□□□□□ -1.04
BDF1YLR399C PRP8P33334 2413 aaKnown RBP8.58□□□□□ -1.04
BDF1YLR399C YER188C-AP0C0V2 99 aa8.58□□□□□ -1.04
BDF1YLR399C DIF1O13577 133 aa8.57□□□□□ -1.04
BDF1YLR399C YLR307C-AQ3E825 87 aa8.57□□□□□ -1.04
BDF1YLR399C HOT13P36078 116 aa8.57□□□□□ -1.04
BDF1YLR399C RPL33AP05744 107 aaKnown RBP8.55□□□□□ -1.04
BDF1YLR399C RPB9P27999 122 aa8.55□□□□□ -1.04
BDF1YLR399C RPL33BP41056 107 aaKnown RBP8.55□□□□□ -1.04
BDF1YLR399C YPR153WQ06537 140 aa8.55□□□□□ -1.04
BDF1YLR399C YNL042W-BQ3E7Z2 85 aa8.55□□□□□ -1.04
BDF1YLR399C PEX22P39718 180 aa8.54□□□□□ -1.04
BDF1YLR399C ECM19Q06011 112 aa8.54□□□□□ -1.04
BDF1YLR399C YOL013W-AP0C272 63 aaPredicted RBP8.52□□□□□ -1.05
BDF1YLR399C SAP30P38429 201 aa8.52□□□□□ -1.05
BDF1YLR399C YEL045CP32616 141 aa8.51□□□□□ -1.05
BDF1YLR399C YDR115WQ04598 105 aa8.5□□□□□ -1.05
BDF1YLR399C Q0032Q9ZZX7 96 aa8.5□□□□□ -1.05
BDF1YLR399C YER145C-AA0A023PYF4 145 aa8.49□□□□□ -1.05
BDF1YLR399C YDR010CQ12426 110 aa8.49□□□□□ -1.05
BDF1YLR399C YOR376W-AQ3E805 51 aa8.48□□□□□ -1.05
BDF1YLR399C YBR144CP34215 104 aa8.47□□□□□ -1.05
BDF1YLR399C MMS2P53152 137 aa8.47□□□□□ -1.05
BDF1YLR399C YHR007C-AQ07074 71 aa8.46□□□□□ -1.05
BDF1YLR399C YGL034CP53186 121 aa8.44□□□□□ -1.06
BDF1YLR399C BSC4P53841 131 aa8.44□□□□□ -1.06
BDF1YLR399C SGF11Q03067 99 aa8.44□□□□□ -1.06
BDF1YLR399C YLR157W-DP0CE99 70 aa8.39□□□□□ -1.07
BDF1YLR399C YOR072WQ08486 104 aa8.39□□□□□ -1.07
BDF1YLR399C SNA2P56508 79 aa8.38□□□□□ -1.07
BDF1YLR399C YLL066W-BQ8TGJ7 56 aa8.38□□□□□ -1.07
BDF1YLR399C TEL1P38110 2787 aa8.38□□□□□ -1.07
BDF1YLR399C YAR064WP39563 99 aa8.38□□□□□ -1.07
BDF1YLR399C SDH6Q3E785 79 aa8.38□□□□□ -1.07
BDF1YLR399C HUB1Q6Q546 73 aa8.37□□□□□ -1.07
BDF1YLR399C YHR125WP38831 101 aa8.36□□□□□ -1.07
BDF1YLR399C DDR2P89113 61 aa8.36□□□□□ -1.07
BDF1YLR399C UTP20P35194 2493 aaKnown RBP8.36□□□□□ -1.07
BDF1YLR399C GIS2P53849 153 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
BDF1YLR399C YMR001C-AQ8TGS9 76 aa8.35□□□□□ -1.07
BDF1YLR399C YCR095W-AQ3E787 52 aa8.34□□□□□ -1.07
BDF1YLR399C YBR182C-AQ8TGU6 64 aa8.33□□□□□ -1.08
BDF1YLR399C AUA1P32450 94 aa8.33□□□□□ -1.08
BDF1YLR399C YML100W-AQ8TGT0 57 aa8.3□□□□□ -1.08
BDF1YLR399C RTC6O14464 93 aa8.28□□□□□ -1.08
BDF1YLR399C YMR230W-AQ3E7B5 62 aa8.28□□□□□ -1.08
BDF1YLR399C YIL156W-BQ2V2P4 73 aa8.27□□□□□ -1.09
BDF1YLR399C YGL193CP53097 103 aa8.26□□□□□ -1.09
BDF1YLR399C YGL041C-BQ3E750 60 aa8.25□□□□□ -1.09
BDF1YLR399C YJL197C-AP0C5P0 93 aa8.25□□□□□ -1.09
BDF1YLR399C YCR043CP25361 127 aa8.25□□□□□ -1.09
BDF1YLR399C MEC1P38111 2368 aa8.23□□□□□ -1.09
BDF1YLR399C YGL015CP33199 130 aa8.22□□□□□ -1.09
BDF1YLR399C YBR027CP38220 110 aa8.18□□□□□ -1.1
BDF1YLR399C YDL012CQ12489 107 aa8.12□□□□□ -1.11
BDF1YLR399C YFR032C-BQ8TGU2 87 aa8.11□□□□□ -1.11
BDF1YLR399C LCL2Q08045 131 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms