RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C TSC3Q3E790 80 aa7.85□□□□□ -1.15
SPT8YLR055C KTI11Q3E840 82 aa7.85□□□□□ -1.15
SPT8YLR055C YMR320WQ04897 101 aa7.83□□□□□ -1.16
SPT8YLR055C AQY2P0CD90 149 aa7.82□□□□□ -1.16
SPT8YLR055C YBL081WP38180 368 aaKnown RBP7.82□□□□□ -1.16
SPT8YLR055C YNL162W-AQ3E7A8 72 aa7.82□□□□□ -1.16
SPT8YLR055C YAL064WP39711 94 aa7.81□□□□□ -1.16
SPT8YLR055C YFL019CP43576 117 aa7.81□□□□□ -1.16
SPT8YLR055C TDA2P40045 126 aa7.8□□□□□ -1.16
SPT8YLR055C YDR246W-AQ3E763 66 aa7.8□□□□□ -1.16
SPT8YLR055C RPL26AP05743 127 aaKnown RBP7.79□□□□□ -1.16
SPT8YLR055C YBL039W-BP0C268 59 aa7.79□□□□□ -1.16
SPT8YLR055C RPL26BP53221 127 aaKnown RBP7.79□□□□□ -1.16
SPT8YLR055C YPR010C-AA5Z2X5 72 aa7.78□□□□□ -1.16
SPT8YLR055C RPL11AP0C0W9 174 aaKnown RBP7.78□□□□□ -1.16
SPT8YLR055C RSM18P40033 138 aa7.78□□□□□ -1.16
SPT8YLR055C ATP20Q12233 115 aa7.78□□□□□ -1.16
SPT8YLR055C UBC4P15731 148 aa7.78□□□□□ -1.16
SPT8YLR055C YKL183C-AQ3E765 70 aa7.78□□□□□ -1.16
SPT8YLR055C RPL33AP05744 107 aaKnown RBP7.77□□□□□ -1.17
SPT8YLR055C RPL33BP41056 107 aaKnown RBP7.77□□□□□ -1.17
SPT8YLR055C SGF11Q03067 99 aa7.77□□□□□ -1.17
SPT8YLR055C FYV5P25585 152 aa7.75□□□□□ -1.17
SPT8YLR055C AIM4P38305 123 aaPredicted RBP7.75□□□□□ -1.17
SPT8YLR055C DIF1O13577 133 aa7.73□□□□□ -1.17
SPT8YLR055C RPL11BQ3E757 174 aaPredicted RBP7.73□□□□□ -1.17
SPT8YLR055C BET1P22804 142 aa7.73□□□□□ -1.17
SPT8YLR055C ICS3P47034 131 aa7.73□□□□□ -1.17
SPT8YLR055C YBR230W-AQ3E762 66 aa7.73□□□□□ -1.17
SPT8YLR055C YJL127C-BQ3E828 52 aa7.72□□□□□ -1.17
SPT8YLR055C IGD1P43598 195 aa7.71□□□□□ -1.17
SPT8YLR055C YDR115WQ04598 105 aa7.71□□□□□ -1.18
SPT8YLR055C YLR412C-AQ3E742 68 aa7.71□□□□□ -1.18
SPT8YLR055C SFT1P43682 97 aa7.69□□□□□ -1.18
SPT8YLR055C YOR314WQ12506 109 aa7.68□□□□□ -1.18
SPT8YLR055C SPC1P46965 94 aa7.67□□□□□ -1.18
SPT8YLR055C NOP10Q6Q547 58 aaPredicted RBP7.67□□□□□ -1.18
SPT8YLR055C YOL014WQ08110 124 aa7.66□□□□□ -1.18
SPT8YLR055C COX23P38824 151 aa7.66□□□□□ -1.18
SPT8YLR055C YLR307C-AQ3E825 87 aa7.66□□□□□ -1.18
SPT8YLR055C KSH1Q8TGJ3 72 aa7.66□□□□□ -1.18
SPT8YLR055C YGR164WP53291 111 aa7.65□□□□□ -1.18
SPT8YLR055C YHR213W-BQ8TGK1 99 aa7.65□□□□□ -1.18
SPT8YLR055C EDC2P40023 145 aaPredicted RBP7.64□□□□□ -1.19
SPT8YLR055C YLL066W-BQ8TGJ7 56 aa7.64□□□□□ -1.19
SPT8YLR055C YNL042W-BQ3E7Z2 85 aa7.64□□□□□ -1.19
SPT8YLR055C Q0032Q9ZZX7 96 aa7.63□□□□□ -1.19
SPT8YLR055C RRT15Q3E811 62 aa7.62□□□□□ -1.19
SPT8YLR055C RTC6O14464 93 aa7.59□□□□□ -1.19
SPT8YLR055C YJL133C-AQ3E7A3 74 aa7.59□□□□□ -1.19
SPT8YLR055C MDN1Q12019 4910 aaKnown RBP7.59□□□□□ -1.19
SPT8YLR055C SNA2P56508 79 aa7.57□□□□□ -1.2
SPT8YLR055C YDR182W-AQ3E796 67 aa7.57□□□□□ -1.2
SPT8YLR055C YAR023CD6VPM8 179 aa7.56□□□□□ -1.2
SPT8YLR055C YOL166W-AQ8TGJ1 51 aa7.56□□□□□ -1.2
SPT8YLR055C RPL36BO14455 100 aaKnown RBP7.55□□□□□ -1.2
SPT8YLR055C RPL36AP05745 100 aaPredicted RBP7.55□□□□□ -1.2
SPT8YLR055C TDA8Q6B2U8 126 aa7.54□□□□□ -1.2
SPT8YLR055C SPT4P32914 102 aaPredicted RBP7.52□□□□□ -1.21
SPT8YLR055C ECM19Q06011 112 aa7.51□□□□□ -1.21
SPT8YLR055C YNL277W-AQ3E7Z0 62 aa7.5□□□□□ -1.21
SPT8YLR055C YHR007C-AQ07074 71 aa7.5□□□□□ -1.21
SPT8YLR055C YGL041C-BQ3E750 60 aa7.5□□□□□ -1.21
SPT8YLR055C BSC4P53841 131 aa7.49□□□□□ -1.21
SPT8YLR055C YHL005CP38752 130 aa7.48□□□□□ -1.21
SPT8YLR055C YIL102CP40488 101 aa7.48□□□□□ -1.21
SPT8YLR055C DDR2P89113 61 aa7.48□□□□□ -1.21
SPT8YLR055C YEL045CP32616 141 aa7.46□□□□□ -1.21
SPT8YLR055C LIP1Q03579 150 aa7.46□□□□□ -1.21
SPT8YLR055C YOR072WQ08486 104 aa7.46□□□□□ -1.21
SPT8YLR055C YLR162WQ06235 118 aa7.45□□□□□ -1.22
SPT8YLR055C HOT13P36078 116 aa7.44□□□□□ -1.22
SPT8YLR055C YGL193CP53097 103 aa7.44□□□□□ -1.22
SPT8YLR055C RPS30AP0CX33 63 aaKnown RBP7.43□□□□□ -1.22
SPT8YLR055C RPS30BP0CX34 63 aaKnown RBP7.43□□□□□ -1.22
SPT8YLR055C MIC10Q96VH5 97 aa7.43□□□□□ -1.22
SPT8YLR055C GIS2P53849 153 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22 RIP-Chip
SPT8YLR055C PEX22P39718 180 aa7.42□□□□□ -1.22
SPT8YLR055C YGR121W-AQ3E816 71 aa7.41□□□□□ -1.22
SPT8YLR055C YPR195CQ06594 109 aa7.4□□□□□ -1.23
SPT8YLR055C YOR381W-AQ3E804 55 aa7.4□□□□□ -1.23
SPT8YLR055C YOR268CQ08734 132 aa7.38□□□□□ -1.23
SPT8YLR055C YBR182C-AQ8TGU6 64 aa7.38□□□□□ -1.23
SPT8YLR055C YOL013W-AP0C272 63 aaPredicted RBP7.36□□□□□ -1.23
SPT8YLR055C YKL065W-AQ2V2P2 73 aa7.35□□□□□ -1.23
SPT8YLR055C YAR064WP39563 99 aa7.32□□□□□ -1.24
SPT8YLR055C YMR230W-AQ3E7B5 62 aa7.31□□□□□ -1.24
SPT8YLR055C YJL197C-AP0C5P0 93 aa7.31□□□□□ -1.24
SPT8YLR055C YMR122CQ03879 124 aa7.27□□□□□ -1.25
SPT8YLR055C OST5Q92316 86 aa7.24□□□□□ -1.25
SPT8YLR055C YCR043CP25361 127 aa7.24□□□□□ -1.25
SPT8YLR055C SAP30P38429 201 aa7.23□□□□□ -1.25
SPT8YLR055C MMS2P53152 137 aa7.23□□□□□ -1.25
SPT8YLR055C MRP10O75012 95 aa7.22□□□□□ -1.25
SPT8YLR055C HHF1P02309 103 aaKnown RBP7.22□□□□□ -1.25
SPT8YLR055C YDR034C-AP0C289 58 aa7.22□□□□□ -1.25
SPT8YLR055C YHR125WP38831 101 aa7.22□□□□□ -1.25
SPT8YLR055C LCL2Q08045 131 aa7.21□□□□□ -1.26
SPT8YLR055C YER188C-AP0C0V2 99 aa7.2□□□□□ -1.26
SPT8YLR055C YBR027CP38220 110 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms