RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YJL197C-AP0C5P0 93 aa1.66□□□□□ -2.14
VPS13YLL040C YHR212W-AP0CX91 67 aa1.66□□□□□ -2.14
VPS13YLL040C HUA1P40325 198 aa1.66□□□□□ -2.14
VPS13YLL040C YGR035W-AQ45U48 73 aa1.66□□□□□ -2.14
VPS13YLL040C YOL166W-AQ8TGJ1 51 aa1.66□□□□□ -2.14
VPS13YLL040C AQY2P0CD90 149 aa1.65□□□□□ -2.14
VPS13YLL040C YCR041WP37265 110 aa1.65□□□□□ -2.14
VPS13YLL040C YOR011W-AQ3E807 68 aa1.65□□□□□ -2.14
VPS13YLL040C YLR156WP0CE96 114 aa1.65□□□□□ -2.15
VPS13YLL040C YLR159WP0CE97 114 aa1.65□□□□□ -2.15
VPS13YLL040C YLR161WP0CE98 114 aa1.65□□□□□ -2.15
VPS13YLL040C YEL045CP32616 141 aa1.65□□□□□ -2.15
VPS13YLL040C SPG1P50088 95 aa1.65□□□□□ -2.15
VPS13YLL040C RPL43AP0CX25 92 aaKnown RBP1.65□□□□□ -2.15
VPS13YLL040C RPL43BP0CX26 92 aa1.65□□□□□ -2.15
VPS13YLL040C YNL277W-AQ3E7Z0 62 aa1.64□□□□□ -2.15
VPS13YLL040C BLM10P43583 2143 aa1.64□□□□□ -2.15
VPS13YLL040C YJL127C-BQ3E828 52 aa1.64□□□□□ -2.15
VPS13YLL040C YHR073W-AP0C5N7 58 aa1.64□□□□□ -2.15
VPS13YLL040C YOL085CQ99345 113 aa1.64□□□□□ -2.15
VPS13YLL040C CDC39P25655 2108 aaKnown RBP1.64□□□□□ -2.15
VPS13YLL040C BSC4P53841 131 aa1.64□□□□□ -2.15
VPS13YLL040C YOL097W-AQ3E7Y9 61 aa1.64□□□□□ -2.15
VPS13YLL040C YLR285C-AQ3E771 56 aa1.63□□□□□ -2.15
VPS13YLL040C AIM4P38305 123 aaPredicted RBP1.63□□□□□ -2.15
VPS13YLL040C TDA2P40045 126 aa1.63□□□□□ -2.15
VPS13YLL040C HUB1Q6Q546 73 aa1.63□□□□□ -2.15
VPS13YLL040C TOR2P32600 2474 aaKnown RBP1.63□□□□□ -2.15
VPS13YLL040C MPC3P53311 146 aa1.63□□□□□ -2.15
VPS13YLL040C RPL11AP0C0W9 174 aaKnown RBP1.63□□□□□ -2.15
VPS13YLL040C YOL013W-AP0C272 63 aaPredicted RBP1.63□□□□□ -2.15
VPS13YLL040C RPL11BQ3E757 174 aaPredicted RBP1.63□□□□□ -2.15
VPS13YLL040C ICS3P47034 131 aa1.63□□□□□ -2.15
VPS13YLL040C YGR025WP53216 100 aa1.63□□□□□ -2.15
VPS13YLL040C YGL260WP53056 76 aa1.62□□□□□ -2.15
VPS13YLL040C IGD1P43598 195 aa1.62□□□□□ -2.15
VPS13YLL040C YJR085CP47131 105 aaKnown RBP1.62□□□□□ -2.15
VPS13YLL040C KSH1Q8TGJ3 72 aa1.62□□□□□ -2.15
VPS13YLL040C TIM10P87108 93 aa1.62□□□□□ -2.15
VPS13YLL040C FMP27Q06179 2628 aa1.62□□□□□ -2.15
VPS13YLL040C YCR001WP25347 104 aa1.62□□□□□ -2.15
VPS13YLL040C YGL015CP33199 130 aa1.62□□□□□ -2.15
VPS13YLL040C RSM18P40033 138 aa1.62□□□□□ -2.15
VPS13YLL040C YHR213W-BQ8TGK1 99 aa1.61□□□□□ -2.15
VPS13YLL040C DIF1O13577 133 aa1.6□□□□□ -2.15
VPS13YLL040C BET1P22804 142 aa1.6□□□□□ -2.15
VPS13YLL040C EDC1P53080 175 aaPredicted RBP1.6□□□□□ -2.15
VPS13YLL040C YJL133C-AQ3E7A3 74 aa1.6□□□□□ -2.15
VPS13YLL040C NOP10Q6Q547 58 aaPredicted RBP1.6□□□□□ -2.15
VPS13YLL040C YPR153WQ06537 140 aa1.6□□□□□ -2.15
VPS13YLL040C MIC10Q96VH5 97 aa1.59□□□□□ -2.15
VPS13YLL040C YCR043CP25361 127 aa1.59□□□□□ -2.15
VPS13YLL040C YHR125WP38831 101 aa1.59□□□□□ -2.15
VPS13YLL040C YOR072WQ08486 104 aa1.59□□□□□ -2.15
VPS13YLL040C AUA1P32450 94 aa1.59□□□□□ -2.16
VPS13YLL040C TRA1P38811 3744 aa1.59□□□□□ -2.16
VPS13YLL040C YBL081WP38180 368 aaKnown RBP1.58□□□□□ -2.16
VPS13YLL040C YBL112CQ3E7Y4 105 aa1.58□□□□□ -2.16
VPS13YLL040C YLR255CO13574 117 aa1.58□□□□□ -2.16
VPS13YLL040C SAP30P38429 201 aa1.58□□□□□ -2.16
VPS13YLL040C SMD1Q02260 146 aaPredicted RBP1.58□□□□□ -2.16
VPS13YLL040C YER188C-AP0C0V2 99 aa1.58□□□□□ -2.16
VPS13YLL040C YAL064WP39711 94 aa1.58□□□□□ -2.16
VPS13YLL040C IRA2P19158 3079 aa1.58□□□□□ -2.16
VPS13YLL040C Q0032Q9ZZX7 96 aa1.57□□□□□ -2.16
VPS13YLL040C YBR056W-AI2HB52 66 aa1.57□□□□□ -2.16
VPS13YLL040C SEC16P48415 2195 aaKnown RBP1.57□□□□□ -2.16
VPS13YLL040C TEL1P38110 2787 aa1.57□□□□□ -2.16
VPS13YLL040C YBR209WP38311 105 aa1.57□□□□□ -2.16
VPS13YLL040C IRA1P18963 3092 aa1.57□□□□□ -2.16
VPS13YLL040C YAR064WP39563 99 aa1.57□□□□□ -2.16
VPS13YLL040C YOL014WQ08110 124 aa1.57□□□□□ -2.16
VPS13YLL040C GIS2P53849 153 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
VPS13YLL040C YLR157W-DP0CE99 70 aa1.56□□□□□ -2.16
VPS13YLL040C YGL088WP53151 121 aa1.55□□□□□ -2.16
VPS13YLL040C YMR122CQ03879 124 aa1.55□□□□□ -2.16
VPS13YLL040C SDH6Q3E785 79 aa1.55□□□□□ -2.16
VPS13YLL040C ATP17Q06405 101 aa1.55□□□□□ -2.16
VPS13YLL040C MEC1P38111 2368 aa1.55□□□□□ -2.16
VPS13YLL040C YBL008W-AQ3E821 79 aa1.54□□□□□ -2.16
VPS13YLL040C YAR023CD6VPM8 179 aa1.54□□□□□ -2.16
VPS13YLL040C YGL149WP53116 101 aa1.54□□□□□ -2.16
VPS13YLL040C OST5Q92316 86 aa1.54□□□□□ -2.16
VPS13YLL040C YOR316C-AQ3E806 69 aa1.53□□□□□ -2.16
VPS13YLL040C RPS30AP0CX33 63 aaKnown RBP1.53□□□□□ -2.16
VPS13YLL040C RPS30BP0CX34 63 aaKnown RBP1.53□□□□□ -2.16
VPS13YLL040C YMR001C-AQ8TGS9 76 aa1.53□□□□□ -2.16
VPS13YLL040C LCL1Q02786 101 aa1.53□□□□□ -2.16
VPS13YLL040C YDL012CQ12489 107 aa1.53□□□□□ -2.16
VPS13YLL040C URA2P07259 2214 aaKnown RBP1.53□□□□□ -2.17
VPS13YLL040C YGR146C-AQ8TGT9 53 aa1.53□□□□□ -2.17
VPS13YLL040C RPL37BP51402 88 aaKnown RBP1.52□□□□□ -2.17
VPS13YLL040C YOR034C-AQ3E735 80 aa1.52□□□□□ -2.17
VPS13YLL040C TOR1P35169 2470 aa1.52□□□□□ -2.17
VPS13YLL040C LCL2Q08045 131 aa1.52□□□□□ -2.17
VPS13YLL040C RPL38P49167 78 aaKnown RBP1.51□□□□□ -2.17
VPS13YLL040C BPH1P25356 2167 aa1.5□□□□□ -2.17
VPS13YLL040C YBR027CP38220 110 aa1.5□□□□□ -2.17
VPS13YLL040C YHR007C-AQ07074 71 aa1.5□□□□□ -2.17
VPS13YLL040C MRP10O75012 95 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms