RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	RPL37B	P51402	88 aa	Known RBP	0.67	□□□□□ -2.3
SIP4	YJL089W	CWC27	Q02770	301 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	ELC1	Q03071	99 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YHR007C-A	Q07074	71 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	TSC3	Q3E790	80 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YIL134C-A	Q45U18	67 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YHR139C-A	O13536	103 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YER181C	P40097	107 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YNL184C	P53876	108 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	YDL157C	Q12082	118 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	TDA8	Q6B2U8	126 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	FUN14	P18411	198 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YBR027C	P38220	110 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	HUR1	P45820	110 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YLR296W	Q05898	108 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	SHH4	Q06236	168 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YLR363W-A	Q3E747	85 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	PAI3	P01094	68 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YFR057W	P43625	151 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	RSM19	P53733	91 aa	Predicted RBP	0.66	□□□□□ -2.3
SIP4	YJL089W	LSM6	Q06406	86 aa	Known RBP	0.66	□□□□□ -2.3
SIP4	YJL089W	NAT5	Q08689	176 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.66	□□□□□ -2.3
SIP4	YJL089W	Q0017	Q9ZZX8	53 aa		0.66	□□□□□ -2.3
SIP4	YJL089W	YEL045C	P32616	141 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	DSE2	P38844	325 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	RSM18	P40033	138 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	MPC3	P53311	146 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	SAE3	P89114	91 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	FYV12	Q08559	129 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	ISD11	Q6Q560	94 aa		0.65	□□□□□ -2.3
SIP4	YJL089W	YJR107C-A	P0CT86	78 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	MID2	P36027	376 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	GLC8	P41818	229 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	ATP18	P81450	59 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	SEN15	Q04675	128 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	YLR162W	Q06235	118 aa		0.65	□□□□□ -2.31
SIP4	YJL089W	YHR073W-A	P0C5N7	58 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	COX23	P38824	151 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	LSM8	P47093	109 aa	Known RBP	0.64	□□□□□ -2.31
SIP4	YJL089W	ECM19	Q06011	112 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	MIC10	Q96VH5	97 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	YOR304C-A	O14468	76 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	YIL102C-A	Q2V2P5	75 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	YOR034C-A	Q3E735	80 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	YHR213W-B	Q8TGK1	99 aa		0.64	□□□□□ -2.31
SIP4	YJL089W	ICS3	P47034	131 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	YGR164W	P53291	111 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	TIM11	P81449	96 aa	Predicted RBP	0.63	□□□□□ -2.31
SIP4	YJL089W	YJL133C-A	Q3E7A3	74 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	YFR009W-A	P0C5M9	85 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	YCR050C	P25630	102 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	UIP3	P39547	235 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	YGL034C	P53186	121 aa		0.63	□□□□□ -2.31
SIP4	YJL089W	COF1	Q03048	143 aa	Known RBP	0.63	□□□□□ -2.31
SIP4	YJL089W	RAD6	P06104	172 aa		0.62	□□□□□ -2.31
SIP4	YJL089W	TDA2	P40045	126 aa		0.62	□□□□□ -2.31
SIP4	YJL089W	RPL36A	P05745	100 aa	Predicted RBP	0.62	□□□□□ -2.31
SIP4	YJL089W	YER187W	P40102	141 aa		0.62	□□□□□ -2.31
SIP4	YJL089W	YDR210W	Q03482	75 aa		0.62	□□□□□ -2.31
SIP4	YJL089W	YDR381C-A	Q3E6R5	114 aa		0.62	□□□□□ -2.31
SIP4	YJL089W	YCR085W	P25650	117 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YHL042W	P38729	150 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YJR128W	P47162	119 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YLR255C	O13574	117 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YPR170W-B	P0C5R9	85 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YJL009W	P47078	108 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	ATP20	Q12233	115 aa		0.61	□□□□□ -2.31
SIP4	YJL089W	YAR064W	P39563	99 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	YNL198C	P40166	100 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	EDC1	P53080	175 aa	Predicted RBP	0.6	□□□□□ -2.31
SIP4	YJL089W	LIP1	Q03579	150 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	YPR153W	Q06537	140 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	YOR316C-A	Q3E806	69 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	SKI6	P46948	246 aa	Predicted RBP	0.6	□□□□□ -2.31
SIP4	YJL089W	YDL012C	Q12489	107 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	YML054C-A	Q3E809	52 aa		0.6	□□□□□ -2.31
SIP4	YJL089W	PBI2	P0CT04	75 aa	Known RBP	0.59	□□□□□ -2.31
SIP4	YJL089W	RPA12	P32529	125 aa	Known RBP	0.59	□□□□□ -2.31
SIP4	YJL089W	RPS29B	P41058	56 aa	Known RBP	0.59	□□□□□ -2.31
SIP4	YJL089W	RPL38	P49167	78 aa	Known RBP	0.59	□□□□□ -2.31
SIP4	YJL089W	YOL014W	Q08110	124 aa		0.59	□□□□□ -2.31
SIP4	YJL089W	YLR361C-A	Q3E795	98 aa		0.59	□□□□□ -2.31
SIP4	YJL089W	RPS29A	P41057	56 aa	Known RBP	0.59	□□□□□ -2.32
SIP4	YJL089W	EMC6	Q12431	108 aa		0.59	□□□□□ -2.32
SIP4	YJL089W	YKL183C-A	Q3E765	70 aa		0.59	□□□□□ -2.32
SIP4	YJL089W	LSO2	Q3E772	92 aa	Known RBP	0.59	□□□□□ -2.32
SIP4	YJL089W	YBR016W	P38216	128 aa		0.58	□□□□□ -2.32
SIP4	YJL089W	YSY6	P38374	65 aa		0.58	□□□□□ -2.32
SIP4	YJL089W	YFL041W-A	Q3E817	63 aa		0.58	□□□□□ -2.32
SIP4	YJL089W	YGR039W	P53225	103 aa		0.58	□□□□□ -2.32
SIP4	YJL089W	YBL008W-A	Q3E821	79 aa		0.58	□□□□□ -2.32
SIP4	YJL089W	COX8	P04039	78 aa		0.57	□□□□□ -2.32
SIP4	YJL089W	YGR146C-A	Q8TGT9	53 aa		0.57	□□□□□ -2.32
SIP4	YJL089W	HHF1	P02309	103 aa	Known RBP	0.57	□□□□□ -2.32
SIP4	YJL089W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.57	□□□□□ -2.32
SIP4	YJL089W	ATX1	P38636	73 aa		0.57	□□□□□ -2.32
SIP4	YJL089W	YER175W-A	Q8TGU4	54 aa		0.57	□□□□□ -2.32
SIP4	YJL089W	OLI1	P61829	76 aa		0.56	□□□□□ -2.32
SIP4	YJL089W	YOR314W	Q12506	109 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms