RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W HHO1P53551 258 aa0.73□□□□□ -2.29
SEC28YIL076W YML079WQ03629 201 aa0.73□□□□□ -2.29
SEC28YIL076W IRC21Q04772 201 aa0.73□□□□□ -2.29
SEC28YIL076W YPL261CQ08976 102 aa0.73□□□□□ -2.29
SEC28YIL076W YBR230W-AQ3E762 66 aa0.73□□□□□ -2.29
SEC28YIL076W YJL127C-BQ3E828 52 aa0.73□□□□□ -2.29
SEC28YIL076W UGX2P32772 223 aa0.72□□□□□ -2.29
SEC28YIL076W FYV4P38783 130 aaPredicted RBP0.72□□□□□ -2.29
SEC28YIL076W YER134CP40081 178 aa0.72□□□□□ -2.29
SEC28YIL076W BSC4P53841 131 aa0.72□□□□□ -2.29
SEC28YIL076W RPL36BO14455 100 aaKnown RBP0.71□□□□□ -2.3
SEC28YIL076W RSM18P40033 138 aa0.71□□□□□ -2.3
SEC28YIL076W NSE4P43124 402 aa0.71□□□□□ -2.3
SEC28YIL076W YNL184CP53876 108 aa0.71□□□□□ -2.3
SEC28YIL076W YOR072WQ08486 104 aa0.71□□□□□ -2.3
SEC28YIL076W FYV12Q08559 129 aa0.71□□□□□ -2.3
SEC28YIL076W ATP5P09457 212 aa0.7□□□□□ -2.3
SEC28YIL076W GTT1P40582 234 aa0.7□□□□□ -2.3
SEC28YIL076W YJR128WP47162 119 aa0.7□□□□□ -2.3
SEC28YIL076W YLR050CQ12155 161 aaKnown RBP0.7□□□□□ -2.3
SEC28YIL076W PAU17Q12370 124 aa0.7□□□□□ -2.3
SEC28YIL076W YKL183C-AQ3E765 70 aa0.7□□□□□ -2.3
SEC28YIL076W IGO2Q9P305 131 aa0.7□□□□□ -2.3
SEC28YIL076W COX7P10174 60 aa0.69□□□□□ -2.3
SEC28YIL076W FUN14P18411 198 aa0.69□□□□□ -2.3
SEC28YIL076W MRPL44P19956 98 aa0.69□□□□□ -2.3
SEC28YIL076W YKL044WP36092 106 aa0.69□□□□□ -2.3
SEC28YIL076W SFT1P43682 97 aa0.69□□□□□ -2.3
SEC28YIL076W ARL3Q02804 198 aa0.69□□□□□ -2.3
SEC28YIL076W YDR210WQ03482 75 aa0.69□□□□□ -2.3
SEC28YIL076W YOR034C-AQ3E735 80 aa0.69□□□□□ -2.3
SEC28YIL076W YOL097W-AQ3E7Y9 61 aa0.69□□□□□ -2.3
SEC28YIL076W SCS22Q6Q595 175 aa0.69□□□□□ -2.3
SEC28YIL076W YBR121C-AP0C5L4 52 aa0.68□□□□□ -2.3
SEC28YIL076W CNL1Q06333 122 aa0.68□□□□□ -2.3
SEC28YIL076W YDL157CQ12082 118 aa0.68□□□□□ -2.3
SEC28YIL076W Q0017Q9ZZX8 53 aa0.68□□□□□ -2.3
SEC28YIL076W YGL230CP53074 147 aa0.67□□□□□ -2.3
SEC28YIL076W SHH4Q06236 168 aa0.67□□□□□ -2.3
SEC28YIL076W PAU23Q07987 124 aa0.67□□□□□ -2.3
SEC28YIL076W ZEO1Q08245 113 aa0.67□□□□□ -2.3
SEC28YIL076W FYV7Q12247 151 aa0.67□□□□□ -2.3
SEC28YIL076W YLR157W-DP0CE99 70 aa0.66□□□□□ -2.3
SEC28YIL076W YHR130CP38834 111 aa0.66□□□□□ -2.3
SEC28YIL076W YJL009WP47078 108 aa0.66□□□□□ -2.3
SEC28YIL076W YGR164WP53291 111 aa0.66□□□□□ -2.3
SEC28YIL076W RSM19P53733 91 aaPredicted RBP0.66□□□□□ -2.3
SEC28YIL076W MIC10Q96VH5 97 aa0.66□□□□□ -2.3
SEC28YIL076W COX8P04039 78 aa0.65□□□□□ -2.31
SEC28YIL076W NHP2P32495 156 aaPredicted RBP0.65□□□□□ -2.31
SEC28YIL076W MSL1P40567 111 aaPredicted RBP0.65□□□□□ -2.31
SEC28YIL076W RPS29AP41057 56 aaKnown RBP0.65□□□□□ -2.31
SEC28YIL076W EDC1P53080 175 aaPredicted RBP0.65□□□□□ -2.31
SEC28YIL076W SEN15Q04675 128 aa0.65□□□□□ -2.31
SEC28YIL076W YIL134C-AQ45U18 67 aa0.65□□□□□ -2.31
SEC28YIL076W YFR009W-AP0C5M9 85 aa0.64□□□□□ -2.31
SEC28YIL076W YHR073W-AP0C5N7 58 aa0.64□□□□□ -2.31
SEC28YIL076W RPS29BP41058 56 aaKnown RBP0.64□□□□□ -2.31
SEC28YIL076W HUR1P45820 110 aa0.64□□□□□ -2.31
SEC28YIL076W COA6Q3E846 104 aa0.64□□□□□ -2.31
SEC28YIL076W YHR213W-BQ8TGK1 99 aa0.64□□□□□ -2.31
SEC28YIL076W YJR107C-AP0CT86 78 aa0.63□□□□□ -2.31
SEC28YIL076W SSS1P35179 80 aa0.63□□□□□ -2.31
SEC28YIL076W ICS3P47034 131 aa0.63□□□□□ -2.31
SEC28YIL076W COF1Q03048 143 aaKnown RBP0.63□□□□□ -2.31
SEC28YIL076W ELC1Q03071 99 aa0.63□□□□□ -2.31
SEC28YIL076W YJL133C-AQ3E7A3 74 aa0.63□□□□□ -2.31
SEC28YIL076W POP7P38291 140 aa0.62□□□□□ -2.31
SEC28YIL076W COX23P38824 151 aa0.62□□□□□ -2.31
SEC28YIL076W YER181CP40097 107 aa0.62□□□□□ -2.31
SEC28YIL076W YLR296WQ05898 108 aa0.62□□□□□ -2.31
SEC28YIL076W LSM6Q06406 86 aaKnown RBP0.62□□□□□ -2.31
SEC28YIL076W YOL014WQ08110 124 aa0.62□□□□□ -2.31
SEC28YIL076W NAT5Q08689 176 aa0.62□□□□□ -2.31
SEC28YIL076W YDR381C-AQ3E6R5 114 aa0.62□□□□□ -2.31
SEC28YIL076W YLR361C-AQ3E795 98 aa0.62□□□□□ -2.31
SEC28YIL076W YOR316C-AQ3E806 69 aa0.62□□□□□ -2.31
SEC28YIL076W RPL36AP05745 100 aaPredicted RBP0.61□□□□□ -2.31
SEC28YIL076W YBR016WP38216 128 aa0.61□□□□□ -2.31
SEC28YIL076W YER187WP40102 141 aa0.61□□□□□ -2.31
SEC28YIL076W CGR1P53188 120 aa0.61□□□□□ -2.31
SEC28YIL076W ATP18P81450 59 aa0.61□□□□□ -2.31
SEC28YIL076W YPR153WQ06537 140 aa0.61□□□□□ -2.31
SEC28YIL076W YLR255CO13574 117 aa0.6□□□□□ -2.31
SEC28YIL076W YCR050CP25630 102 aa0.6□□□□□ -2.31
SEC28YIL076W PAI3P01094 68 aa0.59□□□□□ -2.31
SEC28YIL076W YAR064WP39563 99 aa0.59□□□□□ -2.31
SEC28YIL076W SKI6P46948 246 aaPredicted RBP0.59□□□□□ -2.31
SEC28YIL076W LIP1Q03579 150 aa0.59□□□□□ -2.31
SEC28YIL076W YLR363W-AQ3E747 85 aa0.59□□□□□ -2.31
SEC28YIL076W YDL085C-AQ3E7B7 68 aaKnown RBP0.58□□□□□ -2.32
SEC28YIL076W RPA12P32529 125 aaKnown RBP0.57□□□□□ -2.32
SEC28YIL076W YIL102C-AQ2V2P5 75 aa0.57□□□□□ -2.32
SEC28YIL076W YML054C-AQ3E809 52 aa0.57□□□□□ -2.32
SEC28YIL076W TIM11P81449 96 aaPredicted RBP0.56□□□□□ -2.32
SEC28YIL076W YPR203WQ08994 102 aa0.56□□□□□ -2.32
SEC28YIL076W ATP20Q12233 115 aa0.56□□□□□ -2.32
SEC28YIL076W YGR146C-AQ8TGT9 53 aa0.56□□□□□ -2.32
SEC28YIL076W YOR304C-AO14468 76 aa0.55□□□□□ -2.32
SEC28YIL076W YOL013W-AP0C272 63 aaPredicted RBP0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms