RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W YNL277W-AQ3E7Z0 62 aa4.52□□□□□ -1.69
APE4YHR113W SFT1P43682 97 aa4.51□□□□□ -1.69
APE4YHR113W YLR412C-AQ3E742 68 aa4.51□□□□□ -1.69
APE4YHR113W DDR48P18899 430 aaKnown RBP4.5□□□□□ -1.69
APE4YHR113W LSM6Q06406 86 aaKnown RBP4.5□□□□□ -1.69
APE4YHR113W RAD6P06104 172 aa4.49□□□□□ -1.69
APE4YHR113W ICY1Q04329 127 aa4.49□□□□□ -1.69
APE4YHR113W YBL112CQ3E7Y4 105 aa4.49□□□□□ -1.69
APE4YHR113W INO4P13902 151 aa4.49□□□□□ -1.69
APE4YHR113W HUR1P45820 110 aa4.49□□□□□ -1.69
APE4YHR113W YNL042W-BQ3E7Z2 85 aa4.49□□□□□ -1.69
APE4YHR113W YJL127C-BQ3E828 52 aa4.49□□□□□ -1.69
APE4YHR113W DDR2P89113 61 aa4.48□□□□□ -1.69
APE4YHR113W YBR230W-AQ3E762 66 aa4.48□□□□□ -1.69
APE4YHR113W YLR296WQ05898 108 aa4.47□□□□□ -1.69
APE4YHR113W SHH4Q06236 168 aa4.47□□□□□ -1.69
APE4YHR113W YLR156WP0CE96 114 aa4.45□□□□□ -1.7
APE4YHR113W YLR159WP0CE97 114 aa4.45□□□□□ -1.7
APE4YHR113W YLR161WP0CE98 114 aa4.45□□□□□ -1.7
APE4YHR113W YFL065CP43539 102 aa4.45□□□□□ -1.7
APE4YHR113W YGL149WP53116 101 aa4.45□□□□□ -1.7
APE4YHR113W YPR203WQ08994 102 aa4.45□□□□□ -1.7
APE4YHR113W YIL102C-AQ2V2P5 75 aa4.45□□□□□ -1.7
APE4YHR113W FYV5P25585 152 aa4.44□□□□□ -1.7
APE4YHR113W MPC3P53311 146 aa4.44□□□□□ -1.7
APE4YHR113W SPT4P32914 102 aaPredicted RBP4.43□□□□□ -1.7
APE4YHR113W YLR236CA0A023PZG4 107 aa4.43□□□□□ -1.7
APE4YHR113W YNL198CP40166 100 aa4.43□□□□□ -1.7
APE4YHR113W BSC4P53841 131 aa4.43□□□□□ -1.7
APE4YHR113W HOT13P36078 116 aa4.41□□□□□ -1.7
APE4YHR113W EDC2P40023 145 aaPredicted RBP4.41□□□□□ -1.7
APE4YHR113W YGR164WP53291 111 aa4.41□□□□□ -1.7
APE4YHR113W YHR007C-AQ07074 71 aa4.41□□□□□ -1.7
APE4YHR113W BET1P22804 142 aa4.4□□□□□ -1.71
APE4YHR113W YOR268CQ08734 132 aa4.4□□□□□ -1.71
APE4YHR113W YOR072WQ08486 104 aa4.39□□□□□ -1.71
APE4YHR113W YHR139C-AO13536 103 aa4.38□□□□□ -1.71
APE4YHR113W MSA2P36157 363 aa4.38□□□□□ -1.71
APE4YHR113W SPG1P50088 95 aa4.38□□□□□ -1.71
APE4YHR113W YDR010CQ12426 110 aa4.38□□□□□ -1.71
APE4YHR113W DSE2P38844 325 aa4.37□□□□□ -1.71
APE4YHR113W YGR121W-AQ3E816 71 aa4.37□□□□□ -1.71
APE4YHR113W RPL36BO14455 100 aaKnown RBP4.36□□□□□ -1.71
APE4YHR113W YJR085CP47131 105 aaKnown RBP4.36□□□□□ -1.71
APE4YHR113W TSC3Q3E790 80 aa4.36□□□□□ -1.71
APE4YHR113W YMR230W-AQ3E7B5 62 aa4.36□□□□□ -1.71
APE4YHR113W KSH1Q8TGJ3 72 aa4.36□□□□□ -1.71
APE4YHR113W YJR107C-AP0CT86 78 aa4.35□□□□□ -1.71
APE4YHR113W YCR085WP25650 117 aa4.34□□□□□ -1.71
APE4YHR113W YGL034CP53186 121 aa4.33□□□□□ -1.72
APE4YHR113W ATX1P38636 73 aa4.32□□□□□ -1.72
APE4YHR113W KRE1P17260 313 aa4.31□□□□□ -1.72
APE4YHR113W ATP18P81450 59 aa4.3□□□□□ -1.72
APE4YHR113W YCR050CP25630 102 aa4.3□□□□□ -1.72
APE4YHR113W YBR027CP38220 110 aa4.3□□□□□ -1.72
APE4YHR113W RPA12P32529 125 aaKnown RBP4.29□□□□□ -1.72
APE4YHR113W YHL018WP38744 120 aaPredicted RBP4.28□□□□□ -1.72
APE4YHR113W YFR009W-AP0C5M9 85 aa4.27□□□□□ -1.73
APE4YHR113W YDR119W-AQ2V2P9 66 aa4.27□□□□□ -1.73
APE4YHR113W RSM18P40033 138 aa4.25□□□□□ -1.73
APE4YHR113W YOR376W-AQ3E805 51 aa4.25□□□□□ -1.73
APE4YHR113W YHR213W-BQ8TGK1 99 aa4.25□□□□□ -1.73
APE4YHR113W YJL197C-AP0C5P0 93 aa4.24□□□□□ -1.73
APE4YHR113W MIC10Q96VH5 97 aa4.24□□□□□ -1.73
APE4YHR113W TOM6P33448 61 aa4.23□□□□□ -1.73
APE4YHR113W ICS3P47034 131 aa4.23□□□□□ -1.73
APE4YHR113W YJL133C-AQ3E7A3 74 aa4.23□□□□□ -1.73
APE4YHR113W TDA8Q6B2U8 126 aa4.23□□□□□ -1.73
APE4YHR113W RPL38P49167 78 aaKnown RBP4.22□□□□□ -1.73
APE4YHR113W RSM19P53733 91 aaPredicted RBP4.22□□□□□ -1.73
APE4YHR113W YLR157W-DP0CE99 70 aa4.21□□□□□ -1.74
APE4YHR113W TDA2P40045 126 aa4.2□□□□□ -1.74
APE4YHR113W SKI6P46948 246 aaPredicted RBP4.2□□□□□ -1.74
APE4YHR113W EDC1P53080 175 aaPredicted RBP4.19□□□□□ -1.74
APE4YHR113W ECM19Q06011 112 aa4.19□□□□□ -1.74
APE4YHR113W YDR381C-AQ3E6R5 114 aa4.19□□□□□ -1.74
APE4YHR113W YFL041W-AQ3E817 63 aa4.19□□□□□ -1.74
APE4YHR113W EMC6Q12431 108 aa4.18□□□□□ -1.74
APE4YHR113W YAL063C-AQ3E791 96 aa4.18□□□□□ -1.74
APE4YHR113W YFR032C-BQ8TGU2 87 aa4.18□□□□□ -1.74
APE4YHR113W COX23P38824 151 aa4.18□□□□□ -1.74
APE4YHR113W YLR162WQ06235 118 aa4.18□□□□□ -1.74
APE4YHR113W YHL005CP38752 130 aa4.17□□□□□ -1.74
APE4YHR113W YML100W-AQ8TGT0 57 aa4.17□□□□□ -1.74
APE4YHR113W YOL097W-AQ3E7Y9 61 aa4.16□□□□□ -1.74
APE4YHR113W YHL042WP38729 150 aa4.15□□□□□ -1.75
APE4YHR113W YOL014WQ08110 124 aa4.14□□□□□ -1.75
APE4YHR113W YPL038W-AQ3E7B4 63 aa4.14□□□□□ -1.75
APE4YHR113W YEL045CP32616 141 aa4.13□□□□□ -1.75
APE4YHR113W YBL008W-AQ3E821 79 aa4.12□□□□□ -1.75
APE4YHR113W YCR043CP25361 127 aa4.11□□□□□ -1.75
APE4YHR113W CMC4Q3E7A9 73 aa4.11□□□□□ -1.75
APE4YHR113W COX7P10174 60 aa4.1□□□□□ -1.75
APE4YHR113W ATP20Q12233 115 aa4.09□□□□□ -1.75
APE4YHR113W FYV12Q08559 129 aa4.08□□□□□ -1.76
APE4YHR113W YLR285C-AQ3E771 56 aa4.05□□□□□ -1.76
APE4YHR113W YER187WP40102 141 aa4.04□□□□□ -1.76
APE4YHR113W HHF1P02309 103 aaKnown RBP4.03□□□□□ -1.76
APE4YHR113W QCR10P37299 77 aa4.03□□□□□ -1.76
APE4YHR113W YAR064WP39563 99 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms