RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C RPP2AP05319 106 aaKnown RBP1.99□□□□□ -2.09
NMD2YHR077C YPR195CQ06594 109 aa1.99□□□□□ -2.09
NMD2YHR077C YLR156WP0CE96 114 aa1.98□□□□□ -2.09
NMD2YHR077C YLR159WP0CE97 114 aa1.98□□□□□ -2.09
NMD2YHR077C YLR161WP0CE98 114 aa1.98□□□□□ -2.09
NMD2YHR077C SHH4Q06236 168 aa1.98□□□□□ -2.09
NMD2YHR077C FYV5P25585 152 aa1.98□□□□□ -2.09
NMD2YHR077C PEX22P39718 180 aa1.98□□□□□ -2.09
NMD2YHR077C YGL193CP53097 103 aa1.98□□□□□ -2.09
NMD2YHR077C YJL197C-AP0C5P0 93 aa1.97□□□□□ -2.09
NMD2YHR077C YBL112CQ3E7Y4 105 aa1.97□□□□□ -2.09
NMD2YHR077C YNL042W-BQ3E7Z2 85 aa1.97□□□□□ -2.09
NMD2YHR077C YJL127C-BQ3E828 52 aa1.97□□□□□ -2.09
NMD2YHR077C YAR023CD6VPM8 179 aa1.96□□□□□ -2.1
NMD2YHR077C RAD6P06104 172 aa1.96□□□□□ -2.1
NMD2YHR077C YPL038W-AQ3E7B4 63 aa1.96□□□□□ -2.1
NMD2YHR077C TDA8Q6B2U8 126 aa1.96□□□□□ -2.1
NMD2YHR077C YHL018WP38744 120 aaPredicted RBP1.95□□□□□ -2.1
NMD2YHR077C ICS3P47034 131 aa1.95□□□□□ -2.1
NMD2YHR077C RSM19P53733 91 aaPredicted RBP1.95□□□□□ -2.1
NMD2YHR077C YEL045CP32616 141 aa1.94□□□□□ -2.1
NMD2YHR077C YHL042WP38729 150 aa1.94□□□□□ -2.1
NMD2YHR077C COX23P38824 151 aa1.94□□□□□ -2.1
NMD2YHR077C RSM18P40033 138 aa1.94□□□□□ -2.1
NMD2YHR077C SNA2P56508 79 aa1.94□□□□□ -2.1
NMD2YHR077C YMR230W-AQ3E7B5 62 aa1.94□□□□□ -2.1
NMD2YHR077C ECM12O13529 151 aa1.93□□□□□ -2.1
NMD2YHR077C SPT4P32914 102 aaPredicted RBP1.93□□□□□ -2.1
NMD2YHR077C YPL080CQ02826 108 aa1.93□□□□□ -2.1
NMD2YHR077C YHR213W-BQ8TGK1 99 aa1.93□□□□□ -2.1
NMD2YHR077C YSY6P38374 65 aa1.93□□□□□ -2.1
NMD2YHR077C ECM19Q06011 112 aa1.93□□□□□ -2.1
NMD2YHR077C YDR029WQ12111 104 aa1.93□□□□□ -2.1
NMD2YHR077C RPL26AP05743 127 aaKnown RBP1.93□□□□□ -2.1
NMD2YHR077C RPL26BP53221 127 aaKnown RBP1.93□□□□□ -2.1
NMD2YHR077C EMC6Q12431 108 aa1.93□□□□□ -2.1
NMD2YHR077C YLR285C-AQ3E771 56 aa1.93□□□□□ -2.1
NMD2YHR077C Q0032Q9ZZX7 96 aa1.93□□□□□ -2.1
NMD2YHR077C BET1P22804 142 aa1.92□□□□□ -2.1
NMD2YHR077C EDC2P40023 145 aaPredicted RBP1.92□□□□□ -2.1
NMD2YHR077C SFT1P43682 97 aa1.92□□□□□ -2.1
NMD2YHR077C BSC4P53841 131 aa1.92□□□□□ -2.1
NMD2YHR077C YHR007C-AQ07074 71 aa1.92□□□□□ -2.1
NMD2YHR077C YOL166W-AQ8TGJ1 51 aa1.92□□□□□ -2.1
NMD2YHR077C YDR034C-AP0C289 58 aa1.91□□□□□ -2.1
NMD2YHR077C YLR162WQ06235 118 aa1.91□□□□□ -2.1
NMD2YHR077C LCL2Q08045 131 aa1.91□□□□□ -2.1
NMD2YHR077C YJL133C-AQ3E7A3 74 aa1.91□□□□□ -2.1
NMD2YHR077C MIC10Q96VH5 97 aa1.91□□□□□ -2.1
NMD2YHR077C RPL36BO14455 100 aaKnown RBP1.91□□□□□ -2.1
NMD2YHR077C YGR039WP53225 103 aa1.91□□□□□ -2.1
NMD2YHR077C DDR2P89113 61 aa1.91□□□□□ -2.1
NMD2YHR077C COF1Q03048 143 aaKnown RBP1.9□□□□□ -2.1
NMD2YHR077C YOR072WQ08486 104 aa1.9□□□□□ -2.1
NMD2YHR077C YGL041C-BQ3E750 60 aa1.9□□□□□ -2.1
NMD2YHR077C TOM6P33448 61 aa1.9□□□□□ -2.11
NMD2YHR077C RPL38P49167 78 aaKnown RBP1.9□□□□□ -2.11
NMD2YHR077C ATP20Q12233 115 aa1.9□□□□□ -2.11
NMD2YHR077C YKL183C-AQ3E765 70 aa1.9□□□□□ -2.11
NMD2YHR077C NOP10Q6Q547 58 aaPredicted RBP1.9□□□□□ -2.11
NMD2YHR077C YER187WP40102 141 aa1.89□□□□□ -2.11
NMD2YHR077C TSC3Q3E790 80 aa1.89□□□□□ -2.11
NMD2YHR077C YGR121W-AQ3E816 71 aa1.89□□□□□ -2.11
NMD2YHR077C YBR027CP38220 110 aa1.88□□□□□ -2.11
NMD2YHR077C TDA2P40045 126 aa1.88□□□□□ -2.11
NMD2YHR077C YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
NMD2YHR077C YDL012CQ12489 107 aa1.87□□□□□ -2.11
NMD2YHR077C YCR050CP25630 102 aa1.87□□□□□ -2.11
NMD2YHR077C YJR085CP47131 105 aaKnown RBP1.87□□□□□ -2.11
NMD2YHR077C YIR021W-AQ3E739 70 aa1.86□□□□□ -2.11
NMD2YHR077C YOR304C-AO14468 76 aa1.86□□□□□ -2.11
NMD2YHR077C SPG1P50088 95 aa1.86□□□□□ -2.11
NMD2YHR077C HOT13P36078 116 aa1.85□□□□□ -2.11
NMD2YHR077C YOL013W-AP0C272 63 aaPredicted RBP1.85□□□□□ -2.11
NMD2YHR077C AIM4P38305 123 aaPredicted RBP1.85□□□□□ -2.11
NMD2YHR077C YDR182W-AQ3E796 67 aa1.85□□□□□ -2.11
NMD2YHR077C YOR314WQ12506 109 aa1.84□□□□□ -2.11
NMD2YHR077C YAR064WP39563 99 aa1.83□□□□□ -2.12
NMD2YHR077C RPL36AP05745 100 aaPredicted RBP1.83□□□□□ -2.12
NMD2YHR077C LIP1Q03579 150 aa1.83□□□□□ -2.12
NMD2YHR077C YCR043CP25361 127 aa1.82□□□□□ -2.12
NMD2YHR077C YGL034CP53186 121 aa1.82□□□□□ -2.12
NMD2YHR077C LCL1Q02786 101 aa1.82□□□□□ -2.12
NMD2YHR077C YOL097W-AQ3E7Y9 61 aa1.82□□□□□ -2.12
NMD2YHR077C YBR121C-AP0C5L4 52 aa1.81□□□□□ -2.12
NMD2YHR077C YOR268CQ08734 132 aa1.81□□□□□ -2.12
NMD2YHR077C DDR48P18899 430 aaKnown RBP1.8□□□□□ -2.12
NMD2YHR077C YPR153WQ06537 140 aa1.8□□□□□ -2.12
NMD2YHR077C RPS30AP0CX33 63 aaKnown RBP1.79□□□□□ -2.12
NMD2YHR077C RPS30BP0CX34 63 aaKnown RBP1.79□□□□□ -2.12
NMD2YHR077C MMS2P53152 137 aa1.79□□□□□ -2.12
NMD2YHR077C YLR361C-AQ3E795 98 aa1.79□□□□□ -2.12
NMD2YHR077C YHL005CP38752 130 aa1.79□□□□□ -2.12
NMD2YHR077C YHR073W-AP0C5N7 58 aa1.79□□□□□ -2.12
NMD2YHR077C YHR125WP38831 101 aa1.78□□□□□ -2.12
NMD2YHR077C YJR128WP47162 119 aa1.78□□□□□ -2.13
NMD2YHR077C YLR255CO13574 117 aa1.77□□□□□ -2.13
NMD2YHR077C HHF1P02309 103 aaKnown RBP1.77□□□□□ -2.13
NMD2YHR077C YIL102CP40488 101 aa1.76□□□□□ -2.13
NMD2YHR077C YLR157W-DP0CE99 70 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms