RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C TDA8Q6B2U8 126 aa4.06□□□□□ -1.76
SOD2YHR008C YOR034C-AQ3E735 80 aa4.05□□□□□ -1.76
SOD2YHR008C YFR057WP43625 151 aa4.03□□□□□ -1.76
SOD2YHR008C YAR1P46683 200 aa4.03□□□□□ -1.76
SOD2YHR008C YJL009WP47078 108 aa4.03□□□□□ -1.76
SOD2YHR008C CNL1Q06333 122 aa4.02□□□□□ -1.77
SOD2YHR008C MRPL44P19956 98 aa4.01□□□□□ -1.77
SOD2YHR008C YHR130CP38834 111 aa4.01□□□□□ -1.77
SOD2YHR008C GTT1P40582 234 aa4.01□□□□□ -1.77
SOD2YHR008C MPC3P53311 146 aa4□□□□□ -1.77
SOD2YHR008C DSE2P38844 325 aa3.99□□□□□ -1.77
SOD2YHR008C SHH4Q06236 168 aa3.99□□□□□ -1.77
SOD2YHR008C NHP2P32495 156 aaPredicted RBP3.97□□□□□ -1.77
SOD2YHR008C RSM19P53733 91 aaPredicted RBP3.97□□□□□ -1.77
SOD2YHR008C COF1Q03048 143 aaKnown RBP3.97□□□□□ -1.77
SOD2YHR008C SEC11P15367 167 aa3.95□□□□□ -1.78
SOD2YHR008C YGL230CP53074 147 aa3.95□□□□□ -1.78
SOD2YHR008C UIP3P39547 235 aa3.93□□□□□ -1.78
SOD2YHR008C YGL034CP53186 121 aa3.93□□□□□ -1.78
SOD2YHR008C YLR162WQ06235 118 aa3.93□□□□□ -1.78
SOD2YHR008C COA6Q3E846 104 aa3.9□□□□□ -1.79
SOD2YHR008C MIC10Q96VH5 97 aa3.9□□□□□ -1.79
SOD2YHR008C YER187WP40102 141 aa3.89□□□□□ -1.79
SOD2YHR008C YHR073W-AP0C5N7 58 aa3.88□□□□□ -1.79
SOD2YHR008C MSL1P40567 111 aaPredicted RBP3.87□□□□□ -1.79
SOD2YHR008C HUR1P45820 110 aa3.86□□□□□ -1.79
SOD2YHR008C TSC3Q3E790 80 aa3.86□□□□□ -1.79
SOD2YHR008C ECM19Q06011 112 aa3.85□□□□□ -1.79
SOD2YHR008C YHR213W-BQ8TGK1 99 aa3.85□□□□□ -1.79
SOD2YHR008C EDC1P53080 175 aaPredicted RBP3.83□□□□□ -1.8
SOD2YHR008C YGR164WP53291 111 aa3.83□□□□□ -1.8
SOD2YHR008C CUE4Q04201 117 aaPredicted RBP3.82□□□□□ -1.8
SOD2YHR008C YJL133C-AQ3E7A3 74 aa3.82□□□□□ -1.8
SOD2YHR008C YDL012CQ12489 107 aa3.81□□□□□ -1.8
SOD2YHR008C YLR361C-AQ3E795 98 aa3.81□□□□□ -1.8
SOD2YHR008C ELC1Q03071 99 aa3.78□□□□□ -1.8
SOD2YHR008C YPR153WQ06537 140 aa3.78□□□□□ -1.8
SOD2YHR008C YFR009W-AP0C5M9 85 aa3.76□□□□□ -1.81
SOD2YHR008C YIL134C-AQ45U18 67 aa3.76□□□□□ -1.81
SOD2YHR008C YBR182C-AQ8TGU6 64 aa3.76□□□□□ -1.81
SOD2YHR008C YJR107C-AP0CT86 78 aa3.75□□□□□ -1.81
SOD2YHR008C YBR016WP38216 128 aa3.73□□□□□ -1.81
SOD2YHR008C ICS3P47034 131 aa3.73□□□□□ -1.81
SOD2YHR008C YOR316C-AQ3E806 69 aa3.72□□□□□ -1.81
SOD2YHR008C CGR1P53188 120 aa3.71□□□□□ -1.82
SOD2YHR008C ATP18P81450 59 aa3.71□□□□□ -1.82
SOD2YHR008C SSS1P35179 80 aa3.7□□□□□ -1.82
SOD2YHR008C POP7P38291 140 aa3.7□□□□□ -1.82
SOD2YHR008C YER181CP40097 107 aa3.69□□□□□ -1.82
SOD2YHR008C SEN15Q04675 128 aa3.69□□□□□ -1.82
SOD2YHR008C COX23P38824 151 aa3.68□□□□□ -1.82
SOD2YHR008C YJL144WP47009 104 aa3.67□□□□□ -1.82
SOD2YHR008C LSM6Q06406 86 aaKnown RBP3.67□□□□□ -1.82
SOD2YHR008C NAT5Q08689 176 aa3.67□□□□□ -1.82
SOD2YHR008C YLR296WQ05898 108 aa3.66□□□□□ -1.82
SOD2YHR008C RPL36AP05745 100 aaPredicted RBP3.65□□□□□ -1.83
SOD2YHR008C YML054C-AQ3E809 52 aa3.62□□□□□ -1.83
SOD2YHR008C ISD11Q6Q560 94 aa3.62□□□□□ -1.83
SOD2YHR008C PAI3P01094 68 aa3.6□□□□□ -1.83
SOD2YHR008C YOL014WQ08110 124 aa3.59□□□□□ -1.83
SOD2YHR008C YLR255CO13574 117 aa3.58□□□□□ -1.84
SOD2YHR008C SKI6P46948 246 aaPredicted RBP3.58□□□□□ -1.84
SOD2YHR008C YOR304C-AO14468 76 aa3.57□□□□□ -1.84
SOD2YHR008C YAR064WP39563 99 aa3.57□□□□□ -1.84
SOD2YHR008C RPL37AP49166 88 aaKnown RBP3.54□□□□□ -1.84
SOD2YHR008C YLR363W-AQ3E747 85 aa3.53□□□□□ -1.84
SOD2YHR008C TDA2P40045 126 aa3.52□□□□□ -1.85
SOD2YHR008C YDR381C-AQ3E6R5 114 aa3.52□□□□□ -1.85
SOD2YHR008C YCR050CP25630 102 aa3.51□□□□□ -1.85
SOD2YHR008C YHL042WP38729 150 aa3.49□□□□□ -1.85
SOD2YHR008C LIP1Q03579 150 aa3.46□□□□□ -1.86
SOD2YHR008C RPL38P49167 78 aaKnown RBP3.45□□□□□ -1.86
SOD2YHR008C YBL008W-AQ3E821 79 aa3.4□□□□□ -1.87
SOD2YHR008C YML108WQ03759 105 aa3.37□□□□□ -1.87
SOD2YHR008C ATP20Q12233 115 aa3.37□□□□□ -1.87
SOD2YHR008C YBL044WP38194 122 aa3.36□□□□□ -1.87
SOD2YHR008C HHF1P02309 103 aaKnown RBP3.35□□□□□ -1.87
SOD2YHR008C RAD6P06104 172 aa3.35□□□□□ -1.87
SOD2YHR008C YPL080CQ02826 108 aa3.33□□□□□ -1.88
SOD2YHR008C COX8P04039 78 aa3.32□□□□□ -1.88
SOD2YHR008C YIL102C-AQ2V2P5 75 aa3.32□□□□□ -1.88
SOD2YHR008C YDL085C-AQ3E7B7 68 aaKnown RBP3.32□□□□□ -1.88
SOD2YHR008C TIM11P81449 96 aaPredicted RBP3.31□□□□□ -1.88
SOD2YHR008C YGR146C-AQ8TGT9 53 aa3.31□□□□□ -1.88
SOD2YHR008C RPA12P32529 125 aaKnown RBP3.3□□□□□ -1.88
SOD2YHR008C SAE3P89114 91 aa3.29□□□□□ -1.88
SOD2YHR008C YIL156W-BQ2V2P4 73 aa3.29□□□□□ -1.88
SOD2YHR008C GLC8P41818 229 aa3.28□□□□□ -1.88
SOD2YHR008C RPS30AP0CX33 63 aaKnown RBP3.27□□□□□ -1.89
SOD2YHR008C RPS30BP0CX34 63 aaKnown RBP3.27□□□□□ -1.89
SOD2YHR008C PBI2P0CT04 75 aaKnown RBP3.26□□□□□ -1.89
SOD2YHR008C AIM4P38305 123 aaPredicted RBP3.24□□□□□ -1.89
SOD2YHR008C YGR039WP53225 103 aa3.24□□□□□ -1.89
SOD2YHR008C RPP2AP05319 106 aaKnown RBP3.23□□□□□ -1.89
SOD2YHR008C OLI1P61829 76 aa3.22□□□□□ -1.89
SOD2YHR008C YKL065W-AQ2V2P2 73 aa3.22□□□□□ -1.89
SOD2YHR008C YNL198CP40166 100 aa3.18□□□□□ -1.9
SOD2YHR008C YOL013W-AP0C272 63 aaPredicted RBP3.13□□□□□ -1.91
SOD2YHR008C YIL102CP40488 101 aa3.12□□□□□ -1.91
SOD2YHR008C YCR085WP25650 117 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms