RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W YGR164WP53291 111 aa2.99□□□□□ -1.93
PRE9YGR135W YLR412C-AQ3E742 68 aa2.99□□□□□ -1.93
PRE9YGR135W YAL065CO13511 128 aa2.98□□□□□ -1.93
PRE9YGR135W RPL29P05747 59 aaPredicted RBP2.98□□□□□ -1.93
PRE9YGR135W ERI1P62651 68 aaKnown RBP2.98□□□□□ -1.93
PRE9YGR135W YMR122W-AQ3E842 84 aa2.98□□□□□ -1.93
PRE9YGR135W IRA2P19158 3079 aa2.97□□□□□ -1.93
PRE9YGR135W RSM18P40033 138 aa2.97□□□□□ -1.93
PRE9YGR135W RPL38P49167 78 aaKnown RBP2.97□□□□□ -1.93
PRE9YGR135W NOP10Q6Q547 58 aaPredicted RBP2.97□□□□□ -1.93
PRE9YGR135W YHR125WP38831 101 aa2.96□□□□□ -1.94
PRE9YGR135W TDA2P40045 126 aa2.95□□□□□ -1.94
PRE9YGR135W YFL019CP43576 117 aa2.95□□□□□ -1.94
PRE9YGR135W YDL241WQ07738 123 aa2.95□□□□□ -1.94
PRE9YGR135W YOR314WQ12506 109 aa2.95□□□□□ -1.94
PRE9YGR135W TSC3Q3E790 80 aa2.95□□□□□ -1.94
PRE9YGR135W YDR182W-AQ3E796 67 aa2.95□□□□□ -1.94
PRE9YGR135W RPL36BO14455 100 aaKnown RBP2.94□□□□□ -1.94
PRE9YGR135W RPL36AP05745 100 aaPredicted RBP2.94□□□□□ -1.94
PRE9YGR135W MVB12P42939 101 aa2.94□□□□□ -1.94
PRE9YGR135W YOL166W-AQ8TGJ1 51 aa2.94□□□□□ -1.94
PRE9YGR135W FMP27Q06179 2628 aa2.94□□□□□ -1.94
PRE9YGR135W YHR032W-AP0C5N6 59 aa2.93□□□□□ -1.94
PRE9YGR135W ICS3P47034 131 aa2.93□□□□□ -1.94
PRE9YGR135W YLR162WQ06235 118 aa2.93□□□□□ -1.94
PRE9YGR135W YOL014WQ08110 124 aa2.93□□□□□ -1.94
PRE9YGR135W YGR240C-AQ3E786 66 aa2.93□□□□□ -1.94
PRE9YGR135W COX23P38824 151 aa2.92□□□□□ -1.94
PRE9YGR135W YMR320WQ04897 101 aa2.92□□□□□ -1.94
PRE9YGR135W RDS3Q06835 107 aaPredicted RBP2.92□□□□□ -1.94
PRE9YGR135W YGR121W-AQ3E816 71 aa2.92□□□□□ -1.94
PRE9YGR135W YML100W-AQ8TGT0 57 aa2.92□□□□□ -1.94
PRE9YGR135W YBR056W-AI2HB52 66 aa2.91□□□□□ -1.94
PRE9YGR135W RPL26AP05743 127 aaKnown RBP2.91□□□□□ -1.94
PRE9YGR135W RPC10P40422 70 aa2.91□□□□□ -1.94
PRE9YGR135W SFT1P43682 97 aa2.91□□□□□ -1.94
PRE9YGR135W RPL26BP53221 127 aaKnown RBP2.91□□□□□ -1.94
PRE9YGR135W YOR268CQ08734 132 aa2.91□□□□□ -1.94
PRE9YGR135W YBR230W-AQ3E762 66 aa2.91□□□□□ -1.94
PRE9YGR135W RRT15Q3E811 62 aa2.91□□□□□ -1.94
PRE9YGR135W Q0297Q9ZZV8 51 aa2.91□□□□□ -1.94
PRE9YGR135W YBL039W-BP0C268 59 aa2.9□□□□□ -1.95
PRE9YGR135W AQY2P0CD90 149 aa2.9□□□□□ -1.95
PRE9YGR135W FYV5P25585 152 aa2.9□□□□□ -1.95
PRE9YGR135W YHL005CP38752 130 aa2.9□□□□□ -1.95
PRE9YGR135W YNL277W-AQ3E7Z0 62 aa2.9□□□□□ -1.95
PRE9YGR135W YHR212W-AP0CX91 67 aa2.89□□□□□ -1.95
PRE9YGR135W YCR001WP25347 104 aa2.89□□□□□ -1.95
PRE9YGR135W YJL127C-BQ3E828 52 aa2.89□□□□□ -1.95
PRE9YGR135W YGR035W-AQ45U48 73 aa2.89□□□□□ -1.95
PRE9YGR135W YHR213W-BQ8TGK1 99 aa2.89□□□□□ -1.95
PRE9YGR135W YPR117WQ06116 2489 aa2.88□□□□□ -1.95
PRE9YGR135W YPR010C-AA5Z2X5 72 aa2.88□□□□□ -1.95
PRE9YGR135W RPS30AP0CX33 63 aaKnown RBP2.88□□□□□ -1.95
PRE9YGR135W RPS30BP0CX34 63 aaKnown RBP2.88□□□□□ -1.95
PRE9YGR135W YAL064WP39711 94 aa2.88□□□□□ -1.95
PRE9YGR135W YDR274CP87283 123 aa2.88□□□□□ -1.95
PRE9YGR135W YOR381W-AQ3E804 55 aa2.88□□□□□ -1.95
PRE9YGR135W YLR307C-AQ3E825 87 aa2.88□□□□□ -1.95
PRE9YGR135W BPH1P25356 2167 aa2.88□□□□□ -1.95
PRE9YGR135W LIP1Q03579 150 aa2.87□□□□□ -1.95
PRE9YGR135W RPL33AP05744 107 aaKnown RBP2.86□□□□□ -1.95
PRE9YGR135W RPL33BP41056 107 aaKnown RBP2.86□□□□□ -1.95
PRE9YGR135W YJL133C-AQ3E7A3 74 aa2.86□□□□□ -1.95
PRE9YGR135W YNL042W-BQ3E7Z2 85 aa2.86□□□□□ -1.95
PRE9YGR135W MIC10Q96VH5 97 aa2.86□□□□□ -1.95
PRE9YGR135W IRA1P18963 3092 aa2.86□□□□□ -1.95
PRE9YGR135W YIL102CP40488 101 aa2.85□□□□□ -1.95
PRE9YGR135W YMR122CQ03879 124 aa2.85□□□□□ -1.95
PRE9YGR135W YKL065W-AQ2V2P2 73 aa2.85□□□□□ -1.95
PRE9YGR135W YAR023CD6VPM8 179 aa2.84□□□□□ -1.95
PRE9YGR135W YER188C-AP0C0V2 99 aa2.83□□□□□ -1.96
PRE9YGR135W YOL013W-AP0C272 63 aaPredicted RBP2.83□□□□□ -1.96
PRE9YGR135W SPC1P46965 94 aa2.83□□□□□ -1.96
PRE9YGR135W YLL066W-BQ8TGJ7 56 aa2.82□□□□□ -1.96
PRE9YGR135W OST5Q92316 86 aa2.82□□□□□ -1.96
PRE9YGR135W SGF11Q03067 99 aa2.81□□□□□ -1.96
PRE9YGR135W YPR153WQ06537 140 aa2.81□□□□□ -1.96
PRE9YGR135W FYV12Q08559 129 aa2.81□□□□□ -1.96
PRE9YGR135W YGL193CP53097 103 aa2.8□□□□□ -1.96
PRE9YGR135W Q0032Q9ZZX7 96 aa2.8□□□□□ -1.96
PRE9YGR135W YHR007C-AQ07074 71 aa2.79□□□□□ -1.96
PRE9YGR135W YOR072WQ08486 104 aa2.79□□□□□ -1.96
PRE9YGR135W BSC4P53841 131 aa2.78□□□□□ -1.96
PRE9YGR135W DDR2P89113 61 aa2.78□□□□□ -1.96
PRE9YGR135W YDR010CQ12426 110 aa2.78□□□□□ -1.96
PRE9YGR135W YAR064WP39563 99 aa2.77□□□□□ -1.97
PRE9YGR135W RTC6O14464 93 aa2.76□□□□□ -1.97
PRE9YGR135W YJL197C-AP0C5P0 93 aa2.76□□□□□ -1.97
PRE9YGR135W YLR157W-DP0CE99 70 aa2.76□□□□□ -1.97
PRE9YGR135W AUA1P32450 94 aa2.76□□□□□ -1.97
PRE9YGR135W SDH6Q3E785 79 aa2.76□□□□□ -1.97
PRE9YGR135W GCN1P33892 2672 aaKnown RBP2.76□□□□□ -1.97
PRE9YGR135W SNA2P56508 79 aa2.75□□□□□ -1.97
PRE9YGR135W YPR195CQ06594 109 aa2.75□□□□□ -1.97
PRE9YGR135W YGL041C-BQ3E750 60 aa2.75□□□□□ -1.97
PRE9YGR135W HUB1Q6Q546 73 aa2.75□□□□□ -1.97
PRE9YGR135W TRA1P38811 3744 aa2.74□□□□□ -1.97
PRE9YGR135W YOR376W-AQ3E805 51 aa2.74□□□□□ -1.97
PRE9YGR135W YMR001C-AQ8TGS9 76 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms