RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W TDA2P40045 126 aa3.79□□□□□ -1.8
CDC43YGL155W YPL080CQ02826 108 aa3.79□□□□□ -1.8
CDC43YGL155W YDR029WQ12111 104 aa3.79□□□□□ -1.8
CDC43YGL155W YBL112CQ3E7Y4 105 aa3.79□□□□□ -1.8
CDC43YGL155W YAR023CD6VPM8 179 aa3.78□□□□□ -1.8
CDC43YGL155W YFR009W-AP0C5M9 85 aa3.78□□□□□ -1.8
CDC43YGL155W YHL018WP38744 120 aaPredicted RBP3.78□□□□□ -1.8
CDC43YGL155W YGL041C-BQ3E750 60 aa3.78□□□□□ -1.8
CDC43YGL155W YKL183C-AQ3E765 70 aa3.78□□□□□ -1.8
CDC43YGL155W YJL127C-BQ3E828 52 aa3.78□□□□□ -1.8
CDC43YGL155W Q0032Q9ZZX7 96 aa3.78□□□□□ -1.8
CDC43YGL155W RPL38P49167 78 aaKnown RBP3.77□□□□□ -1.81
CDC43YGL155W SNA2P56508 79 aa3.77□□□□□ -1.81
CDC43YGL155W YBR230W-AQ3E762 66 aa3.77□□□□□ -1.81
CDC43YGL155W YLL066W-BQ8TGJ7 56 aa3.77□□□□□ -1.81
CDC43YGL155W BET1P22804 142 aa3.76□□□□□ -1.81
CDC43YGL155W YNL042W-BQ3E7Z2 85 aa3.76□□□□□ -1.81
CDC43YGL155W MEC1P38111 2368 aa3.76□□□□□ -1.81
CDC43YGL155W ECM12O13529 151 aa3.75□□□□□ -1.81
CDC43YGL155W RSM18P40033 138 aa3.75□□□□□ -1.81
CDC43YGL155W IGD1P43598 195 aa3.75□□□□□ -1.81
CDC43YGL155W RRT15Q3E811 62 aa3.75□□□□□ -1.81
CDC43YGL155W YLR156WP0CE96 114 aa3.74□□□□□ -1.81
CDC43YGL155W YLR159WP0CE97 114 aa3.74□□□□□ -1.81
CDC43YGL155W YLR161WP0CE98 114 aa3.74□□□□□ -1.81
CDC43YGL155W EDC2P40023 145 aaPredicted RBP3.74□□□□□ -1.81
CDC43YGL155W ICS3P47034 131 aa3.74□□□□□ -1.81
CDC43YGL155W EDC1P53080 175 aaPredicted RBP3.74□□□□□ -1.81
CDC43YGL155W ATP20Q12233 115 aa3.74□□□□□ -1.81
CDC43YGL155W YLR307C-AQ3E825 87 aa3.74□□□□□ -1.81
CDC43YGL155W YER039C-AP0CD97 72 aa3.72□□□□□ -1.81
CDC43YGL155W SPT4P32914 102 aaPredicted RBP3.72□□□□□ -1.81
CDC43YGL155W YRA2P36036 203 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
CDC43YGL155W COX23P38824 151 aa3.72□□□□□ -1.81
CDC43YGL155W YER187WP40102 141 aa3.72□□□□□ -1.81
CDC43YGL155W YOR314WQ12506 109 aa3.71□□□□□ -1.82
CDC43YGL155W YHR213W-BQ8TGK1 99 aa3.71□□□□□ -1.82
CDC43YGL155W RPL36BO14455 100 aaKnown RBP3.7□□□□□ -1.82
CDC43YGL155W YCR050CP25630 102 aa3.7□□□□□ -1.82
CDC43YGL155W AIM4P38305 123 aaPredicted RBP3.69□□□□□ -1.82
CDC43YGL155W YGL193CP53097 103 aa3.69□□□□□ -1.82
CDC43YGL155W DDR2P89113 61 aa3.69□□□□□ -1.82
CDC43YGL155W YJL133C-AQ3E7A3 74 aa3.69□□□□□ -1.82
CDC43YGL155W AUA1P32450 94 aa3.67□□□□□ -1.82
CDC43YGL155W PEX22P39718 180 aa3.67□□□□□ -1.82
CDC43YGL155W YHR007C-AQ07074 71 aa3.67□□□□□ -1.82
CDC43YGL155W YOR072WQ08486 104 aa3.67□□□□□ -1.82
CDC43YGL155W TDA8Q6B2U8 126 aa3.67□□□□□ -1.82
CDC43YGL155W HOT13P36078 116 aa3.66□□□□□ -1.82
CDC43YGL155W BSC4P53841 131 aa3.66□□□□□ -1.82
CDC43YGL155W YDR182W-AQ3E796 67 aa3.66□□□□□ -1.82
CDC43YGL155W YOL014WQ08110 124 aa3.65□□□□□ -1.83
CDC43YGL155W YDR246W-AQ3E763 66 aa3.65□□□□□ -1.83
CDC43YGL155W ECM19Q06011 112 aa3.64□□□□□ -1.83
CDC43YGL155W YLR361C-AQ3E795 98 aa3.64□□□□□ -1.83
CDC43YGL155W NOP10Q6Q547 58 aaPredicted RBP3.64□□□□□ -1.83
CDC43YGL155W YDR034C-AP0C289 58 aa3.63□□□□□ -1.83
CDC43YGL155W GIS2P53849 153 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CDC43YGL155W TOR1P35169 2470 aa3.62□□□□□ -1.83
CDC43YGL155W RPL36AP05745 100 aaPredicted RBP3.62□□□□□ -1.83
CDC43YGL155W YEL045CP32616 141 aa3.62□□□□□ -1.83
CDC43YGL155W YLR162WQ06235 118 aa3.62□□□□□ -1.83
CDC43YGL155W YGR121W-AQ3E816 71 aa3.62□□□□□ -1.83
CDC43YGL155W MIC10Q96VH5 97 aa3.62□□□□□ -1.83
CDC43YGL155W YIL102CP40488 101 aa3.59□□□□□ -1.83
CDC43YGL155W SBH1P52870 82 aa3.59□□□□□ -1.83
CDC43YGL155W SPG1P50088 95 aa3.57□□□□□ -1.84
CDC43YGL155W LIP1Q03579 150 aa3.57□□□□□ -1.84
CDC43YGL155W KTI11Q3E840 82 aa3.57□□□□□ -1.84
CDC43YGL155W YOL166W-AQ8TGJ1 51 aa3.57□□□□□ -1.84
CDC43YGL155W YHL005CP38752 130 aa3.56□□□□□ -1.84
CDC43YGL155W YAR064WP39563 99 aa3.56□□□□□ -1.84
CDC43YGL155W YOL013W-AP0C272 63 aaPredicted RBP3.55□□□□□ -1.84
CDC43YGL155W YLR157W-DP0CE99 70 aa3.55□□□□□ -1.84
CDC43YGL155W YPR195CQ06594 109 aa3.55□□□□□ -1.84
CDC43YGL155W YJL197C-AP0C5P0 93 aa3.54□□□□□ -1.84
CDC43YGL155W YOL097W-AQ3E7Y9 61 aa3.54□□□□□ -1.84
CDC43YGL155W YJR085CP47131 105 aaKnown RBP3.53□□□□□ -1.84
CDC43YGL155W RPS30AP0CX33 63 aaKnown RBP3.52□□□□□ -1.85
CDC43YGL155W RPS30BP0CX34 63 aaKnown RBP3.52□□□□□ -1.85
CDC43YGL155W YCR043CP25361 127 aa3.52□□□□□ -1.85
CDC43YGL155W LCL1Q02786 101 aa3.52□□□□□ -1.85
CDC43YGL155W YMR230W-AQ3E7B5 62 aa3.51□□□□□ -1.85
CDC43YGL155W YBR027CP38220 110 aa3.5□□□□□ -1.85
CDC43YGL155W YKL065W-AQ2V2P2 73 aa3.5□□□□□ -1.85
CDC43YGL155W NUM1Q00402 2748 aa3.5□□□□□ -1.85
CDC43YGL155W YGR164WP53291 111 aa3.49□□□□□ -1.85
CDC43YGL155W KSH1Q8TGJ3 72 aa3.49□□□□□ -1.85
CDC43YGL155W UTP20P35194 2493 aaKnown RBP3.48□□□□□ -1.85
CDC43YGL155W YPR153WQ06537 140 aa3.48□□□□□ -1.85
CDC43YGL155W SDH6Q3E785 79 aa3.48□□□□□ -1.85
CDC43YGL155W HUB1Q6Q546 73 aa3.48□□□□□ -1.85
CDC43YGL155W YHR125WP38831 101 aa3.47□□□□□ -1.85
CDC43YGL155W YLR412C-AQ3E742 68 aa3.47□□□□□ -1.85
CDC43YGL155W YBR121C-AP0C5L4 52 aa3.46□□□□□ -1.86
CDC43YGL155W LCL2Q08045 131 aa3.46□□□□□ -1.86
CDC43YGL155W YOR268CQ08734 132 aa3.46□□□□□ -1.86
CDC43YGL155W YOR381W-AQ3E804 55 aa3.46□□□□□ -1.86
CDC43YGL155W MMS2P53152 137 aa3.45□□□□□ -1.86
CDC43YGL155W HHF1P02309 103 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms