RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W RTC6O14464 93 aa4.12□□□□□ -1.75
RPN11YFR004W SMP1P38128 452 aa4.12□□□□□ -1.75
RPN11YFR004W EMC6Q12431 108 aa4.12□□□□□ -1.75
RPN11YFR004W YAR023CD6VPM8 179 aa4.11□□□□□ -1.75
RPN11YFR004W RPL26AP05743 127 aaKnown RBP4.11□□□□□ -1.75
RPN11YFR004W RPL26BP53221 127 aaKnown RBP4.11□□□□□ -1.75
RPN11YFR004W SNA2P56508 79 aa4.11□□□□□ -1.75
RPN11YFR004W COF1Q03048 143 aaKnown RBP4.11□□□□□ -1.75
RPN11YFR004W YDR119W-AQ2V2P9 66 aa4.11□□□□□ -1.75
RPN11YFR004W YLR361C-AQ3E795 98 aa4.11□□□□□ -1.75
RPN11YFR004W UBC4P15731 148 aa4.1□□□□□ -1.75
RPN11YFR004W YBR230W-AQ3E762 66 aa4.1□□□□□ -1.75
RPN11YFR004W TSC3Q3E790 80 aa4.1□□□□□ -1.75
RPN11YFR004W Q0032Q9ZZX7 96 aa4.1□□□□□ -1.75
RPN11YFR004W YFR009W-AP0C5M9 85 aa4.09□□□□□ -1.75
RPN11YFR004W YHL042WP38729 150 aa4.09□□□□□ -1.75
RPN11YFR004W RPL38P49167 78 aaKnown RBP4.09□□□□□ -1.75
RPN11YFR004W YJL127C-BQ3E828 52 aa4.09□□□□□ -1.75
RPN11YFR004W FYV5P25585 152 aa4.08□□□□□ -1.76
RPN11YFR004W YLR285C-AQ3E771 56 aa4.07□□□□□ -1.76
RPN11YFR004W YLR307C-AQ3E825 87 aa4.07□□□□□ -1.76
RPN11YFR004W YHL018WP38744 120 aaPredicted RBP4.06□□□□□ -1.76
RPN11YFR004W YDR029WQ12111 104 aa4.06□□□□□ -1.76
RPN11YFR004W YLR156WP0CE96 114 aa4.05□□□□□ -1.76
RPN11YFR004W YLR159WP0CE97 114 aa4.05□□□□□ -1.76
RPN11YFR004W YLR161WP0CE98 114 aa4.05□□□□□ -1.76
RPN11YFR004W BET1P22804 142 aa4.05□□□□□ -1.76
RPN11YFR004W YSY6P38374 65 aa4.05□□□□□ -1.76
RPN11YFR004W YPR195CQ06594 109 aa4.05□□□□□ -1.76
RPN11YFR004W TDA2P40045 126 aa4.04□□□□□ -1.76
RPN11YFR004W YJR085CP47131 105 aaKnown RBP4.04□□□□□ -1.76
RPN11YFR004W SHH4Q06236 168 aa4.04□□□□□ -1.76
RPN11YFR004W YNL042W-BQ3E7Z2 85 aa4.04□□□□□ -1.76
RPN11YFR004W PEX22P39718 180 aa4.03□□□□□ -1.76
RPN11YFR004W ICS3P47034 131 aa4.03□□□□□ -1.76
RPN11YFR004W RSM19P53733 91 aaPredicted RBP4.03□□□□□ -1.76
RPN11YFR004W YER078W-AQ3E7A2 54 aa4.03□□□□□ -1.76
RPN11YFR004W ECM12O13529 151 aa4.02□□□□□ -1.77
RPN11YFR004W RSM18P40033 138 aa4.02□□□□□ -1.77
RPN11YFR004W YPL038W-AQ3E7B4 63 aa4.02□□□□□ -1.77
RPN11YFR004W RPS28BP0C0X0 67 aaKnown RBP4.01□□□□□ -1.77
RPN11YFR004W SFT1P43682 97 aa4.01□□□□□ -1.77
RPN11YFR004W YGL041C-BQ3E750 60 aa4.01□□□□□ -1.77
RPN11YFR004W RPS28AQ3E7X9 67 aaPredicted RBP4.01□□□□□ -1.77
RPN11YFR004W SPT4P32914 102 aaPredicted RBP4□□□□□ -1.77
RPN11YFR004W BSC4P53841 131 aa4□□□□□ -1.77
RPN11YFR004W YHR007C-AQ07074 71 aa4□□□□□ -1.77
RPN11YFR004W YOL014WQ08110 124 aa4□□□□□ -1.77
RPN11YFR004W YHR213W-BQ8TGK1 99 aa4□□□□□ -1.77
RPN11YFR004W YFL067WP43537 175 aa3.99□□□□□ -1.77
RPN11YFR004W DDR2P89113 61 aa3.99□□□□□ -1.77
RPN11YFR004W LCL2Q08045 131 aa3.99□□□□□ -1.77
RPN11YFR004W ATP20Q12233 115 aa3.99□□□□□ -1.77
RPN11YFR004W YBR121C-AP0C5L4 52 aa3.98□□□□□ -1.77
RPN11YFR004W COX23P38824 151 aa3.98□□□□□ -1.77
RPN11YFR004W YGL193CP53097 103 aa3.98□□□□□ -1.77
RPN11YFR004W YJL133C-AQ3E7A3 74 aa3.98□□□□□ -1.77
RPN11YFR004W RPL36BO14455 100 aaKnown RBP3.97□□□□□ -1.77
RPN11YFR004W EDC2P40023 145 aaPredicted RBP3.97□□□□□ -1.77
RPN11YFR004W YKL183C-AQ3E765 70 aa3.97□□□□□ -1.77
RPN11YFR004W YDR034C-AP0C289 58 aa3.96□□□□□ -1.78
RPN11YFR004W TOM6P33448 61 aa3.96□□□□□ -1.78
RPN11YFR004W YOR072WQ08486 104 aa3.96□□□□□ -1.78
RPN11YFR004W YER039C-AP0CD97 72 aa3.94□□□□□ -1.78
RPN11YFR004W AIM4P38305 123 aaPredicted RBP3.94□□□□□ -1.78
RPN11YFR004W YER187WP40102 141 aa3.94□□□□□ -1.78
RPN11YFR004W YDR246W-AQ3E763 66 aa3.94□□□□□ -1.78
RPN11YFR004W YMR230W-AQ3E7B5 62 aa3.94□□□□□ -1.78
RPN11YFR004W ECM19Q06011 112 aa3.93□□□□□ -1.78
RPN11YFR004W YOR314WQ12506 109 aa3.91□□□□□ -1.78
RPN11YFR004W TDA8Q6B2U8 126 aa3.91□□□□□ -1.78
RPN11YFR004W NOP10Q6Q547 58 aaPredicted RBP3.91□□□□□ -1.78
RPN11YFR004W HHF1P02309 103 aaKnown RBP3.9□□□□□ -1.79
RPN11YFR004W MIC10Q96VH5 97 aa3.9□□□□□ -1.79
RPN11YFR004W YEL045CP32616 141 aa3.89□□□□□ -1.79
RPN11YFR004W YIL102CP40488 101 aa3.89□□□□□ -1.79
RPN11YFR004W YLR162WQ06235 118 aa3.89□□□□□ -1.79
RPN11YFR004W YCR050CP25630 102 aa3.88□□□□□ -1.79
RPN11YFR004W SBH1P52870 82 aa3.88□□□□□ -1.79
RPN11YFR004W KTI11Q3E840 82 aa3.86□□□□□ -1.79
RPN11YFR004W YJL197C-AP0C5P0 93 aa3.85□□□□□ -1.79
RPN11YFR004W YBR027CP38220 110 aa3.85□□□□□ -1.79
RPN11YFR004W YGR121W-AQ3E816 71 aa3.85□□□□□ -1.79
RPN11YFR004W YOL166W-AQ8TGJ1 51 aa3.84□□□□□ -1.79
RPN11YFR004W LIP1Q03579 150 aa3.83□□□□□ -1.8
RPN11YFR004W RPL36AP05745 100 aaPredicted RBP3.82□□□□□ -1.8
RPN11YFR004W YAR064WP39563 99 aa3.82□□□□□ -1.8
RPN11YFR004W SPG1P50088 95 aa3.82□□□□□ -1.8
RPN11YFR004W YLR412C-AQ3E742 68 aa3.82□□□□□ -1.8
RPN11YFR004W MMS2P53152 137 aa3.8□□□□□ -1.8
RPN11YFR004W YDR182W-AQ3E796 67 aa3.8□□□□□ -1.8
RPN11YFR004W LCL1Q02786 101 aa3.79□□□□□ -1.8
RPN11YFR004W YOL013W-AP0C272 63 aaPredicted RBP3.78□□□□□ -1.8
RPN11YFR004W YLR157W-DP0CE99 70 aa3.78□□□□□ -1.8
RPN11YFR004W RPS30AP0CX33 63 aaKnown RBP3.78□□□□□ -1.8
RPN11YFR004W RPS30BP0CX34 63 aaKnown RBP3.78□□□□□ -1.8
RPN11YFR004W YHL005CP38752 130 aa3.78□□□□□ -1.8
RPN11YFR004W YGR164WP53291 111 aa3.78□□□□□ -1.8
RPN11YFR004W YGL034CP53186 121 aa3.77□□□□□ -1.81
RPN11YFR004W YOR268CQ08734 132 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms