RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RPS22BQ3E7Y3 130 aaKnown RBP2.27□□□□□ -2.05
OTU1YFL044C KTI11Q3E840 82 aa2.27□□□□□ -2.05
OTU1YFL044C RAD6P06104 172 aa2.26□□□□□ -2.05
OTU1YFL044C BET1P22804 142 aa2.26□□□□□ -2.05
OTU1YFL044C ATX1P38636 73 aa2.26□□□□□ -2.05
OTU1YFL044C YIL014C-AQ02598 104 aa2.26□□□□□ -2.05
OTU1YFL044C YIL102C-AQ2V2P5 75 aa2.26□□□□□ -2.05
OTU1YFL044C Q0032Q9ZZX7 96 aa2.26□□□□□ -2.05
OTU1YFL044C YPL073CP40323 161 aa2.25□□□□□ -2.05
OTU1YFL044C YLR412C-AQ3E742 68 aa2.25□□□□□ -2.05
OTU1YFL044C YBL039W-BP0C268 59 aa2.24□□□□□ -2.05
OTU1YFL044C UBC4P15731 148 aa2.24□□□□□ -2.05
OTU1YFL044C ATP15P21306 62 aa2.24□□□□□ -2.05
OTU1YFL044C KNH1P50112 268 aa2.24□□□□□ -2.05
OTU1YFL044C COA3Q3E7B2 85 aa2.24□□□□□ -2.05
OTU1YFL044C YNL277W-AQ3E7Z0 62 aa2.24□□□□□ -2.05
OTU1YFL044C HMRA2P0CY13 119 aa2.23□□□□□ -2.05
OTU1YFL044C MVB12P42939 101 aa2.23□□□□□ -2.05
OTU1YFL044C SBH1P52870 82 aa2.23□□□□□ -2.05
OTU1YFL044C YDR119W-AQ2V2P9 66 aa2.23□□□□□ -2.05
OTU1YFL044C SHU1P38751 150 aa2.22□□□□□ -2.05
OTU1YFL044C SPG1P50088 95 aa2.22□□□□□ -2.05
OTU1YFL044C YOL014WQ08110 124 aa2.22□□□□□ -2.05
OTU1YFL044C YKL023C-AQ2V2P3 75 aa2.22□□□□□ -2.05
OTU1YFL044C TSC3Q3E790 80 aa2.22□□□□□ -2.05
OTU1YFL044C YCR085WP25650 117 aa2.21□□□□□ -2.06
OTU1YFL044C FYV4P38783 130 aaPredicted RBP2.21□□□□□ -2.06
OTU1YFL044C YMR103CQ04436 120 aa2.21□□□□□ -2.06
OTU1YFL044C YGR121W-AQ3E816 71 aa2.21□□□□□ -2.06
OTU1YFL044C RPL29P05747 59 aaPredicted RBP2.2□□□□□ -2.06
OTU1YFL044C QCR8P08525 94 aa2.2□□□□□ -2.06
OTU1YFL044C RPA12P32529 125 aaKnown RBP2.2□□□□□ -2.06
OTU1YFL044C SKI6P46948 246 aaPredicted RBP2.2□□□□□ -2.06
OTU1YFL044C YLR296WQ05898 108 aa2.2□□□□□ -2.06
OTU1YFL044C KSH1Q8TGJ3 72 aa2.2□□□□□ -2.06
OTU1YFL044C YML100W-AQ8TGT0 57 aa2.2□□□□□ -2.06
OTU1YFL044C RPL26AP05743 127 aaKnown RBP2.19□□□□□ -2.06
OTU1YFL044C YCR050CP25630 102 aa2.19□□□□□ -2.06
OTU1YFL044C NHP2P32495 156 aaPredicted RBP2.19□□□□□ -2.06
OTU1YFL044C SFT1P43682 97 aa2.19□□□□□ -2.06
OTU1YFL044C RPL26BP53221 127 aaKnown RBP2.19□□□□□ -2.06
OTU1YFL044C POP3P53833 195 aaPredicted RBP2.19□□□□□ -2.06
OTU1YFL044C YNL190WP53872 204 aa2.19□□□□□ -2.06
OTU1YFL044C YML079WQ03629 201 aa2.19□□□□□ -2.06
OTU1YFL044C HPA2Q06592 156 aa2.19□□□□□ -2.06
OTU1YFL044C YFL041W-AQ3E817 63 aa2.18□□□□□ -2.06
OTU1YFL044C YER181CP40097 107 aa2.17□□□□□ -2.06
OTU1YFL044C YGR164WP53291 111 aa2.17□□□□□ -2.06
OTU1YFL044C DSE2P38844 325 aa2.16□□□□□ -2.06
OTU1YFL044C YEL067CP39978 195 aa2.16□□□□□ -2.06
OTU1YFL044C YJL144WP47009 104 aa2.16□□□□□ -2.06
OTU1YFL044C DDR2P89113 61 aa2.16□□□□□ -2.06
OTU1YFL044C FYV12Q08559 129 aa2.16□□□□□ -2.06
OTU1YFL044C YLL006W-AQ3E814 58 aa2.16□□□□□ -2.06
OTU1YFL044C RPL37BP51402 88 aaKnown RBP2.15□□□□□ -2.07
OTU1YFL044C YNR077CP53758 84 aa2.15□□□□□ -2.07
OTU1YFL044C YNL042W-BQ3E7Z2 85 aa2.15□□□□□ -2.07
OTU1YFL044C YHL018WP38744 120 aaPredicted RBP2.14□□□□□ -2.07
OTU1YFL044C MPC3P53311 146 aa2.14□□□□□ -2.07
OTU1YFL044C MRPS12P53732 153 aa2.14□□□□□ -2.07
OTU1YFL044C YDL022C-AP0C5L6 82 aa2.13□□□□□ -2.07
OTU1YFL044C YPL038W-AQ3E7B4 63 aa2.13□□□□□ -2.07
OTU1YFL044C TOM6P33448 61 aa2.12□□□□□ -2.07
OTU1YFL044C YKL044WP36092 106 aa2.12□□□□□ -2.07
OTU1YFL044C YHL042WP38729 150 aa2.12□□□□□ -2.07
OTU1YFL044C YPL261CQ08976 102 aa2.12□□□□□ -2.07
OTU1YFL044C YOR376W-AQ3E805 51 aa2.12□□□□□ -2.07
OTU1YFL044C LSM6Q06406 86 aaKnown RBP2.11□□□□□ -2.07
OTU1YFL044C YDR381C-AQ3E6R5 114 aa2.11□□□□□ -2.07
OTU1YFL044C YBR230W-AQ3E762 66 aa2.11□□□□□ -2.07
OTU1YFL044C MIC10Q96VH5 97 aa2.11□□□□□ -2.07
OTU1YFL044C YER187WP40102 141 aa2.1□□□□□ -2.07
OTU1YFL044C ICY1Q04329 127 aa2.1□□□□□ -2.07
OTU1YFL044C YJL127C-BQ3E828 52 aa2.1□□□□□ -2.07
OTU1YFL044C FYV5P25585 152 aa2.09□□□□□ -2.07
OTU1YFL044C RGM1Q00453 211 aa2.09□□□□□ -2.07
OTU1YFL044C EMC6Q12431 108 aa2.09□□□□□ -2.07
OTU1YFL044C YDR246W-AQ3E763 66 aa2.09□□□□□ -2.07
OTU1YFL044C YLR236CA0A023PZG4 107 aa2.08□□□□□ -2.08
OTU1YFL044C YBR027CP38220 110 aa2.08□□□□□ -2.08
OTU1YFL044C TDA2P40045 126 aa2.08□□□□□ -2.08
OTU1YFL044C RSM19P53733 91 aaPredicted RBP2.08□□□□□ -2.08
OTU1YFL044C BSC4P53841 131 aa2.08□□□□□ -2.08
OTU1YFL044C IRC21Q04772 201 aa2.08□□□□□ -2.08
OTU1YFL044C ATP20Q12233 115 aa2.08□□□□□ -2.08
OTU1YFL044C YSY6P38374 65 aa2.07□□□□□ -2.08
OTU1YFL044C YHL005CP38752 130 aa2.07□□□□□ -2.08
OTU1YFL044C EDC1P53080 175 aaPredicted RBP2.07□□□□□ -2.08
OTU1YFL044C YNL122CP53921 115 aaPredicted RBP2.07□□□□□ -2.08
OTU1YFL044C YOR072WQ08486 104 aa2.07□□□□□ -2.08
OTU1YFL044C ICS3P47034 131 aa2.06□□□□□ -2.08
OTU1YFL044C YHR007C-AQ07074 71 aa2.06□□□□□ -2.08
OTU1YFL044C AIM4P38305 123 aaPredicted RBP2.05□□□□□ -2.08
OTU1YFL044C LIP1Q03579 150 aa2.05□□□□□ -2.08
OTU1YFL044C RPL36BO14455 100 aaKnown RBP2.04□□□□□ -2.08
OTU1YFL044C COX7P10174 60 aa2.04□□□□□ -2.08
OTU1YFL044C HUR1P45820 110 aa2.04□□□□□ -2.08
OTU1YFL044C YOR381W-AQ3E804 55 aa2.04□□□□□ -2.08
OTU1YFL044C YLR285C-AQ3E771 56 aa2.03□□□□□ -2.08
OTU1YFL044C RSM18P40033 138 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms