RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YJL127C-BQ3E828 52 aa4.5□□□□□ -1.69
YPT1YFL038C YSY6P38374 65 aa4.49□□□□□ -1.69
YPT1YFL038C YPL038W-AQ3E7B4 63 aa4.49□□□□□ -1.69
YPT1YFL038C YOR304C-AO14468 76 aa4.48□□□□□ -1.69
YPT1YFL038C EDC1P53080 175 aaPredicted RBP4.47□□□□□ -1.69
YPT1YFL038C SNA2P56508 79 aa4.47□□□□□ -1.69
YPT1YFL038C YGL041C-BQ3E750 60 aa4.47□□□□□ -1.69
YPT1YFL038C YLR285C-AQ3E771 56 aa4.47□□□□□ -1.69
YPT1YFL038C YNL042W-BQ3E7Z2 85 aa4.47□□□□□ -1.69
YPT1YFL038C Q0032Q9ZZX7 96 aa4.47□□□□□ -1.69
YPT1YFL038C DYN1P36022 4092 aa4.47□□□□□ -1.69
YPT1YFL038C RPL11AP0C0W9 174 aaKnown RBP4.45□□□□□ -1.7
YPT1YFL038C BET1P22804 142 aa4.45□□□□□ -1.7
YPT1YFL038C RPL11BQ3E757 174 aaPredicted RBP4.45□□□□□ -1.7
YPT1YFL038C YRA2P36036 203 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
YPT1YFL038C YHL018WP38744 120 aaPredicted RBP4.44□□□□□ -1.7
YPT1YFL038C SPT4P32914 102 aaPredicted RBP4.43□□□□□ -1.7
YPT1YFL038C TDA2P40045 126 aa4.43□□□□□ -1.7
YPT1YFL038C ICS3P47034 131 aa4.43□□□□□ -1.7
YPT1YFL038C YBL112CQ3E7Y4 105 aa4.43□□□□□ -1.7
YPT1YFL038C ECM12O13529 151 aa4.42□□□□□ -1.7
YPT1YFL038C YLR156WP0CE96 114 aa4.42□□□□□ -1.7
YPT1YFL038C YLR159WP0CE97 114 aa4.42□□□□□ -1.7
YPT1YFL038C YLR161WP0CE98 114 aa4.42□□□□□ -1.7
YPT1YFL038C EDC2P40023 145 aaPredicted RBP4.42□□□□□ -1.7
YPT1YFL038C RPL38P49167 78 aaKnown RBP4.42□□□□□ -1.7
YPT1YFL038C YGL193CP53097 103 aa4.42□□□□□ -1.7
YPT1YFL038C YPL080CQ02826 108 aa4.42□□□□□ -1.7
YPT1YFL038C YDR029WQ12111 104 aa4.42□□□□□ -1.7
YPT1YFL038C TOM6P33448 61 aa4.41□□□□□ -1.7
YPT1YFL038C COX23P38824 151 aa4.41□□□□□ -1.7
YPT1YFL038C PEX22P39718 180 aa4.41□□□□□ -1.7
YPT1YFL038C RSM18P40033 138 aa4.41□□□□□ -1.7
YPT1YFL038C YKL183C-AQ3E765 70 aa4.41□□□□□ -1.7
YPT1YFL038C ATP20Q12233 115 aa4.4□□□□□ -1.71
YPT1YFL038C YHR213W-BQ8TGK1 99 aa4.4□□□□□ -1.71
YPT1YFL038C YER039C-AP0CD97 72 aa4.39□□□□□ -1.71
YPT1YFL038C YIR021W-AQ3E739 70 aa4.39□□□□□ -1.71
YPT1YFL038C RPL36BO14455 100 aaKnown RBP4.38□□□□□ -1.71
YPT1YFL038C DDR2P89113 61 aa4.38□□□□□ -1.71
YPT1YFL038C TDA8Q6B2U8 126 aa4.38□□□□□ -1.71
YPT1YFL038C MRP10O75012 95 aa4.37□□□□□ -1.71
YPT1YFL038C GIS2P53849 153 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71 RIP-Chip
YPT1YFL038C YOL014WQ08110 124 aa4.37□□□□□ -1.71
YPT1YFL038C YCR050CP25630 102 aa4.36□□□□□ -1.71
YPT1YFL038C YER187WP40102 141 aa4.36□□□□□ -1.71
YPT1YFL038C YHR007C-AQ07074 71 aa4.36□□□□□ -1.71
YPT1YFL038C YOR072WQ08486 104 aa4.36□□□□□ -1.71
YPT1YFL038C YDR246W-AQ3E763 66 aa4.36□□□□□ -1.71
YPT1YFL038C YJL133C-AQ3E7A3 74 aa4.36□□□□□ -1.71
YPT1YFL038C YDR034C-AP0C289 58 aa4.35□□□□□ -1.71
YPT1YFL038C BSC4P53841 131 aa4.35□□□□□ -1.71
YPT1YFL038C ECM19Q06011 112 aa4.34□□□□□ -1.71
YPT1YFL038C YPR195CQ06594 109 aa4.33□□□□□ -1.72
YPT1YFL038C YOR314WQ12506 109 aa4.33□□□□□ -1.72
YPT1YFL038C YEL045CP32616 141 aa4.32□□□□□ -1.72
YPT1YFL038C HOT13P36078 116 aa4.31□□□□□ -1.72
YPT1YFL038C YLR162WQ06235 118 aa4.31□□□□□ -1.72
YPT1YFL038C YGR121W-AQ3E816 71 aa4.31□□□□□ -1.72
YPT1YFL038C NOP10Q6Q547 58 aaPredicted RBP4.31□□□□□ -1.72
YPT1YFL038C AIM4P38305 123 aaPredicted RBP4.3□□□□□ -1.72
YPT1YFL038C MIC10Q96VH5 97 aa4.3□□□□□ -1.72
YPT1YFL038C YBR182C-AQ8TGU6 64 aa4.29□□□□□ -1.72
YPT1YFL038C YJL197C-AP0C5P0 93 aa4.28□□□□□ -1.72
YPT1YFL038C YDR182W-AQ3E796 67 aa4.28□□□□□ -1.72
YPT1YFL038C YLR415CO13578 112 aa4.27□□□□□ -1.73
YPT1YFL038C YKL069WP36088 180 aa4.27□□□□□ -1.73
YPT1YFL038C SPG1P50088 95 aa4.25□□□□□ -1.73
YPT1YFL038C YOL166W-AQ8TGJ1 51 aa4.25□□□□□ -1.73
YPT1YFL038C RPL36AP05745 100 aaPredicted RBP4.24□□□□□ -1.73
YPT1YFL038C YMR230W-AQ3E7B5 62 aa4.23□□□□□ -1.73
YPT1YFL038C YJR085CP47131 105 aaKnown RBP4.22□□□□□ -1.73
YPT1YFL038C YLR361C-AQ3E795 98 aa4.22□□□□□ -1.73
YPT1YFL038C YOL013W-AP0C272 63 aaPredicted RBP4.21□□□□□ -1.74
YPT1YFL038C YBR027CP38220 110 aa4.21□□□□□ -1.74
YPT1YFL038C LCL1Q02786 101 aa4.21□□□□□ -1.74
YPT1YFL038C LIP1Q03579 150 aa4.21□□□□□ -1.74
YPT1YFL038C YAR064WP39563 99 aa4.2□□□□□ -1.74
YPT1YFL038C LCL2Q08045 131 aa4.19□□□□□ -1.74
YPT1YFL038C YOL097W-AQ3E7Y9 61 aa4.19□□□□□ -1.74
YPT1YFL038C YLR157W-DP0CE99 70 aa4.17□□□□□ -1.74
YPT1YFL038C YCR043CP25361 127 aa4.17□□□□□ -1.74
YPT1YFL038C YIL102CP40488 101 aa4.17□□□□□ -1.74
YPT1YFL038C YHL005CP38752 130 aa4.16□□□□□ -1.74
YPT1YFL038C SBH1P52870 82 aa4.14□□□□□ -1.75
YPT1YFL038C RPS30AP0CX33 63 aaKnown RBP4.13□□□□□ -1.75
YPT1YFL038C RPS30BP0CX34 63 aaKnown RBP4.13□□□□□ -1.75
YPT1YFL038C YOR268CQ08734 132 aa4.13□□□□□ -1.75
YPT1YFL038C MMS2P53152 137 aa4.12□□□□□ -1.75
YPT1YFL038C YPR153WQ06537 140 aa4.11□□□□□ -1.75
YPT1YFL038C YDL012CQ12489 107 aa4.1□□□□□ -1.75
YPT1YFL038C YHR125WP38831 101 aa4.09□□□□□ -1.75
YPT1YFL038C KTI11Q3E840 82 aa4.07□□□□□ -1.76
YPT1YFL038C YGL149WP53116 101 aa4.06□□□□□ -1.76
YPT1YFL038C KSH1Q8TGJ3 72 aa4.06□□□□□ -1.76
YPT1YFL038C YHR073W-AP0C5N7 58 aa4.05□□□□□ -1.76
YPT1YFL038C YGR164WP53291 111 aa4.04□□□□□ -1.76
YPT1YFL038C SDH6Q3E785 79 aa4.04□□□□□ -1.76
YPT1YFL038C YKL065W-AQ2V2P2 73 aa4.03□□□□□ -1.76
YPT1YFL038C DDR48P18899 430 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms