RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	KNH1	P50112	268 aa		4.32	□□□□□ -1.72
VMA3	YEL027W	UBC4	P15731	148 aa		4.31	□□□□□ -1.72
VMA3	YEL027W	MSA2	P36157	363 aa		4.3	□□□□□ -1.72
VMA3	YEL027W	HUR1	P45820	110 aa		4.3	□□□□□ -1.72
VMA3	YEL027W	ICY1	Q04329	127 aa		4.3	□□□□□ -1.72
VMA3	YEL027W	IRC21	Q04772	201 aa		4.3	□□□□□ -1.72
VMA3	YEL027W	LCL1	Q02786	101 aa		4.29	□□□□□ -1.72
VMA3	YEL027W	SHH4	Q06236	168 aa		4.29	□□□□□ -1.72
VMA3	YEL027W	YNL162W-A	Q3E7A8	72 aa		4.29	□□□□□ -1.72
VMA3	YEL027W	YPL038W-A	Q3E7B4	63 aa		4.29	□□□□□ -1.72
VMA3	YEL027W	YLR307C-A	Q3E825	87 aa		4.29	□□□□□ -1.72
VMA3	YEL027W	RPL26A	P05743	127 aa	Known RBP	4.28	□□□□□ -1.72
VMA3	YEL027W	RPL26B	P53221	127 aa	Known RBP	4.28	□□□□□ -1.72
VMA3	YEL027W	YER039C-A	P0CD97	72 aa		4.27	□□□□□ -1.73
VMA3	YEL027W	YGL193C	P53097	103 aa		4.27	□□□□□ -1.73
VMA3	YEL027W	TOM6	P33448	61 aa		4.26	□□□□□ -1.73
VMA3	YEL027W	EMC6	Q12431	108 aa		4.26	□□□□□ -1.73
VMA3	YEL027W	YHL018W	P38744	120 aa	Predicted RBP	4.25	□□□□□ -1.73
VMA3	YEL027W	YOR034C-A	Q3E735	80 aa		4.25	□□□□□ -1.73
VMA3	YEL027W	YNL042W-B	Q3E7Z2	85 aa		4.24	□□□□□ -1.73
VMA3	YEL027W	YLR236C	A0A023PZG4	107 aa		4.23	□□□□□ -1.73
VMA3	YEL027W	YSY6	P38374	65 aa		4.23	□□□□□ -1.73
VMA3	YEL027W	YFL067W	P43537	175 aa		4.23	□□□□□ -1.73
VMA3	YEL027W	YBR230W-A	Q3E762	66 aa		4.23	□□□□□ -1.73
VMA3	YEL027W	FYV5	P25585	152 aa		4.22	□□□□□ -1.73
VMA3	YEL027W	YJL127C-B	Q3E828	52 aa		4.22	□□□□□ -1.73
VMA3	YEL027W	YCR050C	P25630	102 aa		4.21	□□□□□ -1.74
VMA3	YEL027W	SPT4	P32914	102 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA3	YEL027W	MMS2	P53152	137 aa		4.21	□□□□□ -1.74
VMA3	YEL027W	YER187W	P40102	141 aa		4.2	□□□□□ -1.74
VMA3	YEL027W	DDR2	P89113	61 aa		4.2	□□□□□ -1.74
VMA3	YEL027W	YJR107C-A	P0CT86	78 aa		4.19	□□□□□ -1.74
VMA3	YEL027W	YLR285C-A	Q3E771	56 aa		4.19	□□□□□ -1.74
VMA3	YEL027W	YLR156W	P0CE96	114 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	YLR159W	P0CE97	114 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	YLR161W	P0CE98	114 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	SFT1	P43682	97 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	SBH1	P52870	82 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	MPC3	P53311	146 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	YDR246W-A	Q3E763	66 aa		4.18	□□□□□ -1.74
VMA3	YEL027W	EDC1	P53080	175 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA3	YEL027W	BET1	P22804	142 aa		4.16	□□□□□ -1.74
VMA3	YEL027W	EDC2	P40023	145 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA3	YEL027W	YGR121W-A	Q3E816	71 aa		4.16	□□□□□ -1.74
VMA3	YEL027W	RPS28B	P0C0X0	67 aa	Known RBP	4.14	□□□□□ -1.75
VMA3	YEL027W	YBR121C-A	P0C5L4	52 aa		4.14	□□□□□ -1.75
VMA3	YEL027W	ATP18	P81450	59 aa		4.14	□□□□□ -1.75
VMA3	YEL027W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA3	YEL027W	DDR48	P18899	430 aa	Known RBP	4.13	□□□□□ -1.75
VMA3	YEL027W	SPG1	P50088	95 aa		4.13	□□□□□ -1.75
VMA3	YEL027W	BSC4	P53841	131 aa		4.13	□□□□□ -1.75
VMA3	YEL027W	YHR007C-A	Q07074	71 aa		4.13	□□□□□ -1.75
VMA3	YEL027W	TSC3	Q3E790	80 aa		4.13	□□□□□ -1.75
VMA3	YEL027W	RPL36B	O14455	100 aa	Known RBP	4.12	□□□□□ -1.75
VMA3	YEL027W	AIM4	P38305	123 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA3	YEL027W	YOR072W	Q08486	104 aa		4.12	□□□□□ -1.75
VMA3	YEL027W	YGL149W	P53116	101 aa		4.11	□□□□□ -1.75
VMA3	YEL027W	ATP20	Q12233	115 aa		4.11	□□□□□ -1.75
VMA3	YEL027W	KTI11	Q3E840	82 aa		4.11	□□□□□ -1.75
VMA3	YEL027W	YFR009W-A	P0C5M9	85 aa		4.1	□□□□□ -1.75
VMA3	YEL027W	YJR085C	P47131	105 aa	Known RBP	4.1	□□□□□ -1.75
VMA3	YEL027W	KSH1	Q8TGJ3	72 aa		4.1	□□□□□ -1.75
VMA3	YEL027W	YJL197C-A	P0C5P0	93 aa		4.09	□□□□□ -1.75
VMA3	YEL027W	RPL38	P49167	78 aa	Known RBP	4.09	□□□□□ -1.75
VMA3	YEL027W	YOR268C	Q08734	132 aa		4.09	□□□□□ -1.75
VMA3	YEL027W	RSM19	P53733	91 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA3	YEL027W	YKL183C-A	Q3E765	70 aa		4.08	□□□□□ -1.76
VMA3	YEL027W	RSM18	P40033	138 aa		4.07	□□□□□ -1.76
VMA3	YEL027W	YDR010C	Q12426	110 aa		4.07	□□□□□ -1.76
VMA3	YEL027W	TDA8	Q6B2U8	126 aa		4.07	□□□□□ -1.76
VMA3	YEL027W	NOP10	Q6Q547	58 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA3	YEL027W	YGR164W	P53291	111 aa		4.06	□□□□□ -1.76
VMA3	YEL027W	YLR412C-A	Q3E742	68 aa		4.06	□□□□□ -1.76
VMA3	YEL027W	TDA2	P40045	126 aa		4.05	□□□□□ -1.76
VMA3	YEL027W	YMR230W-A	Q3E7B5	62 aa		4.05	□□□□□ -1.76
VMA3	YEL027W	YBR027C	P38220	110 aa		4.03	□□□□□ -1.76
VMA3	YEL027W	YOR314W	Q12506	109 aa		4.03	□□□□□ -1.76
VMA3	YEL027W	ICS3	P47034	131 aa		4.02	□□□□□ -1.77
VMA3	YEL027W	YDR182W-A	Q3E796	67 aa		4.02	□□□□□ -1.77
VMA3	YEL027W	YOL166W-A	Q8TGJ1	51 aa		4.02	□□□□□ -1.77
VMA3	YEL027W	YHR213W-B	Q8TGK1	99 aa		4.02	□□□□□ -1.77
VMA3	YEL027W	RPL36A	P05745	100 aa	Predicted RBP	4.01	□□□□□ -1.77
VMA3	YEL027W	YOL014W	Q08110	124 aa		4.01	□□□□□ -1.77
VMA3	YEL027W	YLR162W	Q06235	118 aa		3.99	□□□□□ -1.77
VMA3	YEL027W	YHL005C	P38752	130 aa		3.98	□□□□□ -1.77
VMA3	YEL027W	COX23	P38824	151 aa		3.98	□□□□□ -1.77
VMA3	YEL027W	YJL133C-A	Q3E7A3	74 aa		3.98	□□□□□ -1.77
VMA3	YEL027W	ECM19	Q06011	112 aa		3.97	□□□□□ -1.77
VMA3	YEL027W	MIC10	Q96VH5	97 aa		3.97	□□□□□ -1.77
VMA3	YEL027W	YLR157W-D	P0CE99	70 aa		3.95	□□□□□ -1.78
VMA3	YEL027W	RPS30A	P0CX33	63 aa	Known RBP	3.95	□□□□□ -1.78
VMA3	YEL027W	RPS30B	P0CX34	63 aa	Known RBP	3.95	□□□□□ -1.78
VMA3	YEL027W	YOL097W-A	Q3E7Y9	61 aa		3.95	□□□□□ -1.78
VMA3	YEL027W	YEL045C	P32616	141 aa		3.94	□□□□□ -1.78
VMA3	YEL027W	HOT13	P36078	116 aa		3.94	□□□□□ -1.78
VMA3	YEL027W	YOR381W-A	Q3E804	55 aa		3.94	□□□□□ -1.78
VMA3	YEL027W	YNL277W-A	Q3E7Z0	62 aa		3.93	□□□□□ -1.78
VMA3	YEL027W	LIP1	Q03579	150 aa		3.92	□□□□□ -1.78
VMA3	YEL027W	YBR182C-A	Q8TGU6	64 aa		3.92	□□□□□ -1.78
VMA3	YEL027W	YIL102C	P40488	101 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms