RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C YEL008WP40001 126 aa4.45□□□□□ -1.7
PAT1YCR077C SRL1Q08673 210 aa4.45□□□□□ -1.7
PAT1YCR077C YGR035W-AQ45U48 73 aa4.45□□□□□ -1.7
PAT1YCR077C FYV5P25585 152 aa4.44□□□□□ -1.7
PAT1YCR077C KRE9P39005 276 aa4.44□□□□□ -1.7
PAT1YCR077C RGM1Q00453 211 aa4.44□□□□□ -1.7
PAT1YCR077C YHL005CP38752 130 aa4.43□□□□□ -1.7
PAT1YCR077C MPC3P53311 146 aa4.43□□□□□ -1.7
PAT1YCR077C YOR034C-AQ3E735 80 aa4.43□□□□□ -1.7
PAT1YCR077C YPR153WQ06537 140 aa4.43□□□□□ -1.7
PAT1YCR077C ARC15P40518 154 aaRIP-Chip data4.42□□□□□ -1.7not detected
PAT1YCR077C SPG1P50088 95 aa4.42□□□□□ -1.7
PAT1YCR077C IRC21Q04772 201 aa4.42□□□□□ -1.7
PAT1YCR077C YOR011W-AQ3E807 68 aa4.42□□□□□ -1.7
PAT1YCR077C HOT13P36078 116 aa4.42□□□□□ -1.7
PAT1YCR077C MEC1P38111 2368 aa4.42□□□□□ -1.7
PAT1YCR077C RPR2P40571 144 aa4.41□□□□□ -1.7
PAT1YCR077C YOR020W-AQ3E824 90 aa4.41□□□□□ -1.7
PAT1YCR077C TMC1Q08422 150 aaPredicted RBP4.4□□□□□ -1.7
PAT1YCR077C YFR032C-BQ8TGU2 87 aa4.4□□□□□ -1.7
PAT1YCR077C YLR236CA0A023PZG4 107 aa4.4□□□□□ -1.71
PAT1YCR077C RPS30AP0CX33 63 aaKnown RBP4.39□□□□□ -1.71
PAT1YCR077C RPS30BP0CX34 63 aaKnown RBP4.39□□□□□ -1.71
PAT1YCR077C YKL065W-AQ2V2P2 73 aa4.39□□□□□ -1.71
PAT1YCR077C YIR020CP40575 100 aa4.39□□□□□ -1.71
PAT1YCR077C YMR244WQ04018 355 aa4.39□□□□□ -1.71
PAT1YCR077C RPL36BO14455 100 aaKnown RBP4.38□□□□□ -1.71
PAT1YCR077C RPL36AP05745 100 aaPredicted RBP4.38□□□□□ -1.71
PAT1YCR077C COX14P39103 70 aa4.38□□□□□ -1.71
PAT1YCR077C YOL166W-AQ8TGJ1 51 aa4.38□□□□□ -1.71
PAT1YCR077C YER145C-AA0A023PYF4 145 aa4.37□□□□□ -1.71
PAT1YCR077C YJR107C-AP0CT86 78 aa4.36□□□□□ -1.71
PAT1YCR077C RPL38P49167 78 aaKnown RBP4.36□□□□□ -1.71
PAT1YCR077C SPC1P46965 94 aa4.36□□□□□ -1.71
PAT1YCR077C MRPS8Q03799 155 aa4.36□□□□□ -1.71
PAT1YCR077C YBR219CP38317 127 aa4.35□□□□□ -1.71
PAT1YCR077C FYV12Q08559 129 aa4.35□□□□□ -1.71
PAT1YCR077C YIL156W-BQ2V2P4 73 aa4.35□□□□□ -1.71
PAT1YCR077C YLL006W-AQ3E814 58 aa4.35□□□□□ -1.71
PAT1YCR077C QCR10P37299 77 aa4.35□□□□□ -1.71
PAT1YCR077C YDR182W-AQ3E796 67 aa4.35□□□□□ -1.71
PAT1YCR077C PMP3P87284 55 aa4.34□□□□□ -1.71
PAT1YCR077C YOL014WQ08110 124 aa4.34□□□□□ -1.71
PAT1YCR077C VAM10Q08474 114 aa4.34□□□□□ -1.72
PAT1YCR077C LIP1Q03579 150 aa4.33□□□□□ -1.72
PAT1YCR077C HOR7Q05827 59 aa4.32□□□□□ -1.72
PAT1YCR077C ATP18P81450 59 aa4.32□□□□□ -1.72
PAT1YCR077C YER175W-AQ8TGU4 54 aa4.32□□□□□ -1.72
PAT1YCR077C RPL43AP0CX25 92 aaKnown RBP4.3□□□□□ -1.72
PAT1YCR077C RPL43BP0CX26 92 aa4.3□□□□□ -1.72
PAT1YCR077C TAR1Q8TGM6 124 aa4.3□□□□□ -1.72
PAT1YCR077C SOM1Q05676 74 aa4.29□□□□□ -1.72
PAT1YCR077C RPS11AP0CX47 156 aaKnown RBP4.28□□□□□ -1.72
PAT1YCR077C RPS11BP0CX48 156 aaKnown RBP4.28□□□□□ -1.72
PAT1YCR077C YFR009W-AP0C5M9 85 aa4.27□□□□□ -1.73
PAT1YCR077C YDR010CQ12426 110 aa4.27□□□□□ -1.73
PAT1YCR077C RPL29P05747 59 aaPredicted RBP4.27□□□□□ -1.73
PAT1YCR077C YCR095W-AQ3E787 52 aa4.27□□□□□ -1.73
PAT1YCR077C EDC2P40023 145 aaPredicted RBP4.26□□□□□ -1.73
PAT1YCR077C YMR122W-AQ3E842 84 aa4.26□□□□□ -1.73
PAT1YCR077C YCR043CP25361 127 aa4.25□□□□□ -1.73
PAT1YCR077C YAR023CD6VPM8 179 aa4.24□□□□□ -1.73
PAT1YCR077C COX23P38824 151 aa4.24□□□□□ -1.73
PAT1YCR077C YIL102CP40488 101 aa4.24□□□□□ -1.73
PAT1YCR077C YNL042W-BQ3E7Z2 85 aa4.24□□□□□ -1.73
PAT1YCR077C YDL241WQ07738 123 aa4.23□□□□□ -1.73
PAT1YCR077C Q0297Q9ZZV8 51 aa4.23□□□□□ -1.73
PAT1YCR077C YCR041WP37265 110 aa4.21□□□□□ -1.73
PAT1YCR077C MVB12P42939 101 aa4.2□□□□□ -1.74
PAT1YCR077C YGR240C-AQ3E786 66 aa4.2□□□□□ -1.74
PAT1YCR077C YGL149WP53116 101 aa4.2□□□□□ -1.74
PAT1YCR077C MRX7P53869 86 aa4.19□□□□□ -1.74
PAT1YCR077C RDS3Q06835 107 aaPredicted RBP4.19□□□□□ -1.74
PAT1YCR077C YNL162W-AQ3E7A8 72 aa4.19□□□□□ -1.74
PAT1YCR077C YBL008W-AQ3E821 79 aa4.19□□□□□ -1.74
PAT1YCR077C RPC10P40422 70 aa4.18□□□□□ -1.74
PAT1YCR077C SNA2P56508 79 aa4.18□□□□□ -1.74
PAT1YCR077C ECM19Q06011 112 aa4.17□□□□□ -1.74
PAT1YCR077C UTP20P35194 2493 aaKnown RBP4.17□□□□□ -1.74
PAT1YCR077C YPR010C-AA5Z2X5 72 aa4.17□□□□□ -1.74
PAT1YCR077C BSC4P53841 131 aa4.16□□□□□ -1.74
PAT1YCR077C HUB1Q6Q546 73 aa4.16□□□□□ -1.74
PAT1YCR077C RTC6O14464 93 aa4.15□□□□□ -1.75
PAT1YCR077C YBL039W-BP0C268 59 aa4.14□□□□□ -1.75
PAT1YCR077C AQY2P0CD90 149 aa4.14□□□□□ -1.75
PAT1YCR077C YBR230W-AQ3E762 66 aa4.14□□□□□ -1.75
PAT1YCR077C YLR157W-DP0CE99 70 aa4.14□□□□□ -1.75
PAT1YCR077C YHR212W-AP0CX91 67 aa4.14□□□□□ -1.75
PAT1YCR077C YCL042WP25572 119 aa4.14□□□□□ -1.75
PAT1YCR077C YCR001WP25347 104 aa4.13□□□□□ -1.75
PAT1YCR077C IGD1P43598 195 aa4.13□□□□□ -1.75
PAT1YCR077C YMR001C-AQ8TGS9 76 aa4.13□□□□□ -1.75
PAT1YCR077C YJL197C-AP0C5P0 93 aa4.12□□□□□ -1.75
PAT1YCR077C YLR307C-AQ3E825 87 aa4.12□□□□□ -1.75
PAT1YCR077C LCL2Q08045 131 aa4.12□□□□□ -1.75
PAT1YCR077C YHR213W-BQ8TGK1 99 aa4.12□□□□□ -1.75
PAT1YCR077C YJL127C-BQ3E828 52 aa4.11□□□□□ -1.75
PAT1YCR077C RPL33AP05744 107 aaKnown RBP4.1□□□□□ -1.75
PAT1YCR077C RPL33BP41056 107 aaKnown RBP4.1□□□□□ -1.75
PAT1YCR077C ATP17Q06405 101 aa4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms