RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YMR230W-AQ3E7B5 62 aa3.78□□□□□ -1.8
PDB1YBR221C YGR035W-AQ45U48 73 aa3.78□□□□□ -1.8
PDB1YBR221C SPC1P46965 94 aa3.77□□□□□ -1.81
PDB1YBR221C YKL065W-AQ2V2P2 73 aa3.77□□□□□ -1.81
PDB1YBR221C MRPL38P35996 138 aaPredicted RBP3.76□□□□□ -1.81
PDB1YBR221C YJR146WP47174 117 aa3.76□□□□□ -1.81
PDB1YBR221C YGL014C-AP0C5N1 53 aa3.75□□□□□ -1.81
PDB1YBR221C MRPL31P14063 131 aaPredicted RBP3.75□□□□□ -1.81
PDB1YBR221C IRC21Q04772 201 aa3.75□□□□□ -1.81
PDB1YBR221C YAL065CO13511 128 aa3.74□□□□□ -1.81
PDB1YBR221C YER188C-AP0C0V2 99 aa3.74□□□□□ -1.81
PDB1YBR221C MIX17Q03667 156 aa3.74□□□□□ -1.81
PDB1YBR221C RDS3Q06835 107 aaPredicted RBP3.73□□□□□ -1.81
PDB1YBR221C RPL39P04650 51 aa3.72□□□□□ -1.81
PDB1YBR221C YBL071CP38185 102 aa3.72□□□□□ -1.81
PDB1YBR221C MPC2P38857 129 aa3.72□□□□□ -1.81
PDB1YBR221C MRX7P53869 86 aa3.72□□□□□ -1.81
PDB1YBR221C VPS55P47111 140 aa3.71□□□□□ -1.82
PDB1YBR221C PAU6P0CE90 120 aa3.7□□□□□ -1.82
PDB1YBR221C PAU18P0CE91 120 aa3.7□□□□□ -1.82
PDB1YBR221C QCR9P22289 66 aa3.7□□□□□ -1.82
PDB1YBR221C YIL163CP40448 117 aa3.7□□□□□ -1.82
PDB1YBR221C YMR122CQ03879 124 aa3.7□□□□□ -1.82
PDB1YBR221C COX19Q3E731 98 aa3.7□□□□□ -1.82
PDB1YBR221C YGR121W-AQ3E816 71 aa3.7□□□□□ -1.82
PDB1YBR221C RPL33AP05744 107 aaKnown RBP3.69□□□□□ -1.82
PDB1YBR221C YHR173CP38864 112 aa3.69□□□□□ -1.82
PDB1YBR221C PAU8P0CE92 120 aa3.68□□□□□ -1.82
PDB1YBR221C PAU11P0CE93 120 aa3.68□□□□□ -1.82
PDB1YBR221C AIM4P38305 123 aaPredicted RBP3.68□□□□□ -1.82
PDB1YBR221C PAU13P38725 120 aa3.68□□□□□ -1.82
PDB1YBR221C PAU4P53427 120 aa3.68□□□□□ -1.82
PDB1YBR221C PAU10Q03050 120 aa3.68□□□□□ -1.82
PDB1YBR221C YLR162WQ06235 118 aa3.68□□□□□ -1.82
PDB1YBR221C PAU9Q3E770 120 aa3.68□□□□□ -1.82
PDB1YBR221C TAR1Q8TGM6 124 aa3.68□□□□□ -1.82
PDB1YBR221C DSE2P38844 325 aa3.67□□□□□ -1.82
PDB1YBR221C VAM10Q08474 114 aa3.67□□□□□ -1.82
PDB1YBR221C FPR2P32472 135 aa3.66□□□□□ -1.82
PDB1YBR221C BSC4P53841 131 aa3.66□□□□□ -1.82
PDB1YBR221C YSY6P38374 65 aa3.65□□□□□ -1.83
PDB1YBR221C SPI1P40092 148 aa3.65□□□□□ -1.83
PDB1YBR221C PRM7Q12459 698 aa3.65□□□□□ -1.83
PDB1YBR221C YMR105W-AQ8TGS8 64 aa3.65□□□□□ -1.83
PDB1YBR221C AIM19P40502 157 aa3.64□□□□□ -1.83
PDB1YBR221C YDR010CQ12426 110 aa3.63□□□□□ -1.83
PDB1YBR221C YKL023C-AQ2V2P3 75 aa3.63□□□□□ -1.83
PDB1YBR221C YGL041C-BQ3E750 60 aa3.63□□□□□ -1.83
PDB1YBR221C PAU1P0CE88 120 aa3.62□□□□□ -1.83
PDB1YBR221C PAU14P0CE89 120 aa3.62□□□□□ -1.83
PDB1YBR221C AGA2P32781 87 aa3.61□□□□□ -1.83
PDB1YBR221C LCL2Q08045 131 aa3.61□□□□□ -1.83
PDB1YBR221C ERI1P62651 68 aaKnown RBP3.6□□□□□ -1.83
PDB1YBR221C CCW12Q12127 133 aa3.6□□□□□ -1.83
PDB1YBR221C YDR210WQ03482 75 aa3.59□□□□□ -1.83
PDB1YBR221C YIL156W-BQ2V2P4 73 aa3.59□□□□□ -1.83
PDB1YBR221C COA3Q3E7B2 85 aa3.58□□□□□ -1.84
PDB1YBR221C NOP10Q6Q547 58 aaPredicted RBP3.58□□□□□ -1.84
PDB1YBR221C YHR212W-AP0CX91 67 aa3.57□□□□□ -1.84
PDB1YBR221C AUA1P32450 94 aa3.57□□□□□ -1.84
PDB1YBR221C YDR246W-AQ3E763 66 aa3.57□□□□□ -1.84
PDB1YBR221C RPS11AP0CX47 156 aaKnown RBP3.56□□□□□ -1.84
PDB1YBR221C RPS11BP0CX48 156 aaKnown RBP3.56□□□□□ -1.84
PDB1YBR221C YBR219CP38317 127 aa3.56□□□□□ -1.84
PDB1YBR221C PAU7P39545 55 aa3.56□□□□□ -1.84
PDB1YBR221C YEL008WP40001 126 aa3.56□□□□□ -1.84
PDB1YBR221C MRPS12P53732 153 aa3.55□□□□□ -1.84
PDB1YBR221C PAU20Q08322 120 aa3.54□□□□□ -1.84
PDB1YBR221C YGR240C-AQ3E786 66 aa3.53□□□□□ -1.84
PDB1YBR221C HOR7Q05827 59 aa3.52□□□□□ -1.85
PDB1YBR221C YDR182W-AQ3E796 67 aa3.48□□□□□ -1.85
PDB1YBR221C YDL022C-AP0C5L6 82 aa3.47□□□□□ -1.85
PDB1YBR221C YNL146C-AQ3E7Z1 64 aa3.47□□□□□ -1.85
PDB1YBR221C GIS2P53849 153 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
PDB1YBR221C YNL042W-BQ3E7Z2 85 aa3.46□□□□□ -1.86
PDB1YBR221C YJL009WP47078 108 aa3.45□□□□□ -1.86
PDB1YBR221C YLR255CO13574 117 aa3.42□□□□□ -1.86
PDB1YBR221C AQY2P0CD90 149 aa3.42□□□□□ -1.86
PDB1YBR221C COX9P07255 59 aa3.41□□□□□ -1.86
PDB1YBR221C ATP17Q06405 101 aa3.41□□□□□ -1.86
PDB1YBR221C YOR192C-CQ3E736 78 aa3.4□□□□□ -1.87
PDB1YBR221C YMR122W-AQ3E842 84 aa3.4□□□□□ -1.87
PDB1YBR221C YCR001WP25347 104 aa3.39□□□□□ -1.87
PDB1YBR221C YMR007WQ03675 126 aa3.39□□□□□ -1.87
PDB1YBR221C HUB1Q6Q546 73 aa3.39□□□□□ -1.87
PDB1YBR221C RPS30AP0CX33 63 aaKnown RBP3.38□□□□□ -1.87
PDB1YBR221C RPS30BP0CX34 63 aaKnown RBP3.38□□□□□ -1.87
PDB1YBR221C YNL122CP53921 115 aaPredicted RBP3.38□□□□□ -1.87
PDB1YBR221C SGF11Q03067 99 aa3.38□□□□□ -1.87
PDB1YBR221C YOR034C-AQ3E735 80 aa3.38□□□□□ -1.87
PDB1YBR221C EDC1P53080 175 aaPredicted RBP3.36□□□□□ -1.87
PDB1YBR221C YNL190WP53872 204 aa3.36□□□□□ -1.87
PDB1YBR221C MGR2Q02889 113 aa3.36□□□□□ -1.87
PDB1YBR221C YBR201C-AQ2V2Q3 67 aa3.36□□□□□ -1.87
PDB1YBR221C SHU1P38751 150 aa3.35□□□□□ -1.87
PDB1YBR221C LCL1Q02786 101 aa3.34□□□□□ -1.87
PDB1YBR221C ATP18P81450 59 aa3.33□□□□□ -1.88
PDB1YBR221C YHR086W-AQ3E746 53 aa3.33□□□□□ -1.88
PDB1YBR221C YOL097W-AQ3E7Y9 61 aa3.33□□□□□ -1.88
PDB1YBR221C Q0032Q9ZZX7 96 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms