RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	MSA2	P36157	363 aa		3.54	□□□□□ -1.84
ATG12	YBR217W	POP7	P38291	140 aa		3.54	□□□□□ -1.84
ATG12	YBR217W	YOR072W	Q08486	104 aa		3.54	□□□□□ -1.84
ATG12	YBR217W	YBR027C	P38220	110 aa		3.53	□□□□□ -1.84
ATG12	YBR217W	GLC8	P41818	229 aa		3.53	□□□□□ -1.84
ATG12	YBR217W	CWC27	Q02770	301 aa		3.53	□□□□□ -1.84
ATG12	YBR217W	YLR296W	Q05898	108 aa		3.53	□□□□□ -1.84
ATG12	YBR217W	RPL36B	O14455	100 aa	Known RBP	3.52	□□□□□ -1.85
ATG12	YBR217W	HOT13	P36078	116 aa		3.52	□□□□□ -1.85
ATG12	YBR217W	KSH1	Q8TGJ3	72 aa		3.52	□□□□□ -1.85
ATG12	YBR217W	YHR139C-A	O13536	103 aa		3.51	□□□□□ -1.85
ATG12	YBR217W	RPP2A	P05319	106 aa	Known RBP	3.51	□□□□□ -1.85
ATG12	YBR217W	SFT1	P43682	97 aa		3.49	□□□□□ -1.85
ATG12	YBR217W	YBR182C-A	Q8TGU6	64 aa		3.49	□□□□□ -1.85
ATG12	YBR217W	YIL102C-A	Q2V2P5	75 aa		3.48	□□□□□ -1.85
ATG12	YBR217W	RSM18	P40033	138 aa		3.47	□□□□□ -1.85
ATG12	YBR217W	OST2	P46964	130 aa		3.47	□□□□□ -1.85
ATG12	YBR217W	YNL184C	P53876	108 aa		3.47	□□□□□ -1.85
ATG12	YBR217W	YNL198C	P40166	100 aa		3.46	□□□□□ -1.86
ATG12	YBR217W	YJR107C-A	P0CT86	78 aa		3.45	□□□□□ -1.86
ATG12	YBR217W	DSE2	P38844	325 aa		3.45	□□□□□ -1.86
ATG12	YBR217W	CMC4	Q3E7A9	73 aa		3.45	□□□□□ -1.86
ATG12	YBR217W	YPR170W-B	P0C5R9	85 aa		3.44	□□□□□ -1.86
ATG12	YBR217W	YAR1	P46683	200 aa		3.44	□□□□□ -1.86
ATG12	YBR217W	TSC3	Q3E790	80 aa		3.44	□□□□□ -1.86
ATG12	YBR217W	YFR009W-A	P0C5M9	85 aa		3.42	□□□□□ -1.86
ATG12	YBR217W	UIP3	P39547	235 aa		3.42	□□□□□ -1.86
ATG12	YBR217W	ATP18	P81450	59 aa		3.42	□□□□□ -1.86
ATG12	YBR217W	YAL063C-A	Q3E791	96 aa		3.42	□□□□□ -1.86
ATG12	YBR217W	TDA8	Q6B2U8	126 aa		3.42	□□□□□ -1.86
ATG12	YBR217W	YHL018W	P38744	120 aa	Predicted RBP	3.41	□□□□□ -1.86
ATG12	YBR217W	YHL005C	P38752	130 aa		3.41	□□□□□ -1.86
ATG12	YBR217W	RSM19	P53733	91 aa	Predicted RBP	3.39	□□□□□ -1.87
ATG12	YBR217W	YHR213W-B	Q8TGK1	99 aa		3.39	□□□□□ -1.87
ATG12	YBR217W	YLR157W-D	P0CE99	70 aa		3.38	□□□□□ -1.87
ATG12	YBR217W	ICS3	P47034	131 aa		3.38	□□□□□ -1.87
ATG12	YBR217W	YLR162W	Q06235	118 aa		3.38	□□□□□ -1.87
ATG12	YBR217W	YJL133C-A	Q3E7A3	74 aa		3.37	□□□□□ -1.87
ATG12	YBR217W	MIC10	Q96VH5	97 aa		3.37	□□□□□ -1.87
ATG12	YBR217W	YEL045C	P32616	141 aa		3.36	□□□□□ -1.87
ATG12	YBR217W	LSO2	Q3E772	92 aa	Known RBP	3.36	□□□□□ -1.87
ATG12	YBR217W	YOL097W-A	Q3E7Y9	61 aa		3.36	□□□□□ -1.87
ATG12	YBR217W	ECM19	Q06011	112 aa		3.35	□□□□□ -1.87
ATG12	YBR217W	SHH4	Q06236	168 aa		3.35	□□□□□ -1.87
ATG12	YBR217W	YDR381C-A	Q3E6R5	114 aa		3.35	□□□□□ -1.87
ATG12	YBR217W	EDC1	P53080	175 aa	Predicted RBP	3.34	□□□□□ -1.87
ATG12	YBR217W	TMA7	Q3E764	64 aa	Known RBP	3.34	□□□□□ -1.87
ATG12	YBR217W	COX7	P10174	60 aa		3.33	□□□□□ -1.88
ATG12	YBR217W	YNL122C	P53921	115 aa	Predicted RBP	3.33	□□□□□ -1.88
ATG12	YBR217W	PBI2	P0CT04	75 aa	Known RBP	3.32	□□□□□ -1.88
ATG12	YBR217W	COX23	P38824	151 aa		3.32	□□□□□ -1.88
ATG12	YBR217W	YOL014W	Q08110	124 aa		3.32	□□□□□ -1.88
ATG12	YBR217W	YCR043C	P25361	127 aa		3.31	□□□□□ -1.88
ATG12	YBR217W	RPA12	P32529	125 aa	Known RBP	3.31	□□□□□ -1.88
ATG12	YBR217W	RPL38	P49167	78 aa	Known RBP	3.31	□□□□□ -1.88
ATG12	YBR217W	COF1	Q03048	143 aa	Known RBP	3.3	□□□□□ -1.88
ATG12	YBR217W	RPL37B	P51402	88 aa	Known RBP	3.29	□□□□□ -1.88
ATG12	YBR217W	TDA2	P40045	126 aa		3.28	□□□□□ -1.88
ATG12	YBR217W	ISD11	Q6Q560	94 aa		3.28	□□□□□ -1.88
ATG12	YBR217W	RAD6	P06104	172 aa		3.25	□□□□□ -1.89
ATG12	YBR217W	YHL042W	P38729	150 aa		3.25	□□□□□ -1.89
ATG12	YBR217W	ATP20	Q12233	115 aa		3.23	□□□□□ -1.89
ATG12	YBR217W	YLR361C-A	Q3E795	98 aa		3.23	□□□□□ -1.89
ATG12	YBR217W	YOR304C-A	O14468	76 aa		3.21	□□□□□ -1.9
ATG12	YBR217W	RPL36A	P05745	100 aa	Predicted RBP	3.21	□□□□□ -1.9
ATG12	YBR217W	YCR085W	P25650	117 aa		3.21	□□□□□ -1.9
ATG12	YBR217W	YER187W	P40102	141 aa		3.21	□□□□□ -1.9
ATG12	YBR217W	YDL012C	Q12489	107 aa		3.21	□□□□□ -1.9
ATG12	YBR217W	YHR073W-A	P0C5N7	58 aa		3.2	□□□□□ -1.9
ATG12	YBR217W	YCR050C	P25630	102 aa		3.2	□□□□□ -1.9
ATG12	YBR217W	ATX1	P38636	73 aa		3.2	□□□□□ -1.9
ATG12	YBR217W	YAR064W	P39563	99 aa		3.2	□□□□□ -1.9
ATG12	YBR217W	SKI6	P46948	246 aa	Predicted RBP	3.2	□□□□□ -1.9
ATG12	YBR217W	INO4	P13902	151 aa		3.19	□□□□□ -1.9
ATG12	YBR217W	YPL080C	Q02826	108 aa		3.16	□□□□□ -1.9
ATG12	YBR217W	EMC6	Q12431	108 aa		3.16	□□□□□ -1.9
ATG12	YBR217W	YLR285C-A	Q3E771	56 aa		3.15	□□□□□ -1.91
ATG12	YBR217W	YOR316C-A	Q3E806	69 aa		3.14	□□□□□ -1.91
ATG12	YBR217W	YGR164W	P53291	111 aa		3.13	□□□□□ -1.91
ATG12	YBR217W	YPR153W	Q06537	140 aa		3.13	□□□□□ -1.91
ATG12	YBR217W	YJL144W	P47009	104 aa		3.11	□□□□□ -1.91
ATG12	YBR217W	FYV12	Q08559	129 aa		3.11	□□□□□ -1.91
ATG12	YBR217W	YSY6	P38374	65 aa		3.1	□□□□□ -1.91
ATG12	YBR217W	YJR128W	P47162	119 aa		3.09	□□□□□ -1.91
ATG12	YBR217W	Q0017	Q9ZZX8	53 aa		3.08	□□□□□ -1.92
ATG12	YBR217W	HHF1	P02309	103 aa	Known RBP	3.07	□□□□□ -1.92
ATG12	YBR217W	YFL041W-A	Q3E817	63 aa		3.07	□□□□□ -1.92
ATG12	YBR217W	YOL013W-A	P0C272	63 aa	Predicted RBP	3.06	□□□□□ -1.92
ATG12	YBR217W	YGR039W	P53225	103 aa		3.06	□□□□□ -1.92
ATG12	YBR217W	SLO1	Q3E784	85 aa		3.06	□□□□□ -1.92
ATG12	YBR217W	YKL183C-A	Q3E765	70 aa		3.05	□□□□□ -1.92
ATG12	YBR217W	YIL102C	P40488	101 aa		3.04	□□□□□ -1.92
ATG12	YBR217W	YJL009W	P47078	108 aa		3.03	□□□□□ -1.92
ATG12	YBR217W	LIP1	Q03579	150 aa		3.03	□□□□□ -1.92
ATG12	YBR217W	YFL065C	P43539	102 aa		3.02	□□□□□ -1.93
ATG12	YBR217W	YPR203W	Q08994	102 aa		3.02	□□□□□ -1.93
ATG12	YBR217W	NOP10	Q6Q547	58 aa	Predicted RBP	3.01	□□□□□ -1.93
ATG12	YBR217W	YER175W-A	Q8TGU4	54 aa		3.01	□□□□□ -1.93
ATG12	YBR217W	YOR314W	Q12506	109 aa		3	□□□□□ -1.93
ATG12	YBR217W	YDR210W	Q03482	75 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms