RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W MSL1P40567 111 aaPredicted RBP3.21□□□□□ -1.9
SHP1YBL058W YEL045CP32616 141 aa3.2□□□□□ -1.9
SHP1YBL058W SSS1P35179 80 aa3.2□□□□□ -1.9
SHP1YBL058W PAU23Q07987 124 aa3.2□□□□□ -1.9
SHP1YBL058W YDL157CQ12082 118 aa3.2□□□□□ -1.9
SHP1YBL058W YER078W-AQ3E7A2 54 aa3.2□□□□□ -1.9
SHP1YBL058W MPC3P53311 146 aa3.19□□□□□ -1.9
SHP1YBL058W YIL002W-AQ3E7Z5 69 aa3.19□□□□□ -1.9
SHP1YBL058W MSA2P36157 363 aa3.18□□□□□ -1.9
SHP1YBL058W YHR130CP38834 111 aa3.18□□□□□ -1.9
SHP1YBL058W OST2P46964 130 aa3.17□□□□□ -1.9
SHP1YBL058W RSM18P40033 138 aa3.16□□□□□ -1.9
SHP1YBL058W YLR157W-DP0CE99 70 aa3.15□□□□□ -1.91
SHP1YBL058W YML108WQ03759 105 aa3.15□□□□□ -1.91
SHP1YBL058W FYV7Q12247 151 aa3.15□□□□□ -1.91
SHP1YBL058W YOL097W-AQ3E7Y9 61 aa3.15□□□□□ -1.91
SHP1YBL058W COA6Q3E846 104 aa3.14□□□□□ -1.91
SHP1YBL058W TDA8Q6B2U8 126 aa3.14□□□□□ -1.91
SHP1YBL058W NHP2P32495 156 aaPredicted RBP3.13□□□□□ -1.91
SHP1YBL058W YAR1P46683 200 aa3.13□□□□□ -1.91
SHP1YBL058W CWC27Q02770 301 aa3.13□□□□□ -1.91
SHP1YBL058W FYV12Q08559 129 aa3.13□□□□□ -1.91
SHP1YBL058W FUN14P18411 198 aa3.12□□□□□ -1.91
SHP1YBL058W DSE2P38844 325 aa3.12□□□□□ -1.91
SHP1YBL058W CGR1P53188 120 aa3.12□□□□□ -1.91
SHP1YBL058W ELC1Q03071 99 aa3.11□□□□□ -1.91
SHP1YBL058W Q0017Q9ZZX8 53 aa3.11□□□□□ -1.91
SHP1YBL058W HUR1P45820 110 aa3.1□□□□□ -1.91
SHP1YBL058W NAT5Q08689 176 aa3.1□□□□□ -1.91
SHP1YBL058W YPL080CQ02826 108 aa3.09□□□□□ -1.91
SHP1YBL058W RSM19P53733 91 aaPredicted RBP3.07□□□□□ -1.92
SHP1YBL058W TSC3Q3E790 80 aa3.05□□□□□ -1.92
SHP1YBL058W YER181CP40097 107 aa3.04□□□□□ -1.92
SHP1YBL058W YLR162WQ06235 118 aa3.04□□□□□ -1.92
SHP1YBL058W SHH4Q06236 168 aa3.04□□□□□ -1.92
SHP1YBL058W POP7P38291 140 aa3.03□□□□□ -1.92
SHP1YBL058W YHR213W-BQ8TGK1 99 aa3.03□□□□□ -1.92
SHP1YBL058W MIC10Q96VH5 97 aa3.03□□□□□ -1.92
SHP1YBL058W ECM19Q06011 112 aa3.02□□□□□ -1.93
SHP1YBL058W LSM6Q06406 86 aaKnown RBP3.02□□□□□ -1.93
SHP1YBL058W PAI3P01094 68 aa3.01□□□□□ -1.93
SHP1YBL058W YFR009W-AP0C5M9 85 aa3.01□□□□□ -1.93
SHP1YBL058W YJR107C-AP0CT86 78 aa3.01□□□□□ -1.93
SHP1YBL058W YJR128WP47162 119 aa3.01□□□□□ -1.93
SHP1YBL058W YDR210WQ03482 75 aa3.01□□□□□ -1.93
SHP1YBL058W YJL133C-AQ3E7A3 74 aa3.01□□□□□ -1.93
SHP1YBL058W COF1Q03048 143 aaKnown RBP3□□□□□ -1.93
SHP1YBL058W YLR296WQ05898 108 aa3□□□□□ -1.93
SHP1YBL058W ATP18P81450 59 aa2.99□□□□□ -1.93
SHP1YBL058W YHR073W-AP0C5N7 58 aa2.98□□□□□ -1.93
SHP1YBL058W YLR363W-AQ3E747 85 aa2.98□□□□□ -1.93
SHP1YBL058W YER187WP40102 141 aa2.97□□□□□ -1.93
SHP1YBL058W ICS3P47034 131 aa2.97□□□□□ -1.93
SHP1YBL058W YJL009WP47078 108 aa2.95□□□□□ -1.94
SHP1YBL058W YLR361C-AQ3E795 98 aa2.95□□□□□ -1.94
SHP1YBL058W EDC1P53080 175 aaPredicted RBP2.94□□□□□ -1.94
SHP1YBL058W LSM8P47093 109 aaKnown RBP2.93□□□□□ -1.94
SHP1YBL058W YGR164WP53291 111 aa2.93□□□□□ -1.94
SHP1YBL058W YOL014WQ08110 124 aa2.93□□□□□ -1.94
SHP1YBL058W COX23P38824 151 aa2.92□□□□□ -1.94
SHP1YBL058W YGL034CP53186 121 aa2.92□□□□□ -1.94
SHP1YBL058W ISD11Q6Q560 94 aa2.92□□□□□ -1.94
SHP1YBL058W YDL012CQ12489 107 aa2.9□□□□□ -1.95
SHP1YBL058W SAE3P89114 91 aa2.89□□□□□ -1.95
SHP1YBL058W YDL085C-AQ3E7B7 68 aaKnown RBP2.89□□□□□ -1.95
SHP1YBL058W RPS29AP41057 56 aaKnown RBP2.88□□□□□ -1.95
SHP1YBL058W YPR153WQ06537 140 aa2.88□□□□□ -1.95
SHP1YBL058W YDR381C-AQ3E6R5 114 aa2.88□□□□□ -1.95
SHP1YBL058W LSO2Q3E772 92 aaKnown RBP2.88□□□□□ -1.95
SHP1YBL058W RPS29BP41058 56 aaKnown RBP2.87□□□□□ -1.95
SHP1YBL058W YJL144WP47009 104 aa2.87□□□□□ -1.95
SHP1YBL058W YOR316C-AQ3E806 69 aa2.87□□□□□ -1.95
SHP1YBL058W RPL36AP05745 100 aaPredicted RBP2.86□□□□□ -1.95
SHP1YBL058W RPL38P49167 78 aaKnown RBP2.86□□□□□ -1.95
SHP1YBL058W YIL102C-AQ2V2P5 75 aa2.86□□□□□ -1.95
SHP1YBL058W YKL183C-AQ3E765 70 aa2.86□□□□□ -1.95
SHP1YBL058W YOR304C-AO14468 76 aa2.85□□□□□ -1.95
SHP1YBL058W YAR064WP39563 99 aa2.83□□□□□ -1.96
SHP1YBL058W YCR050CP25630 102 aa2.82□□□□□ -1.96
SHP1YBL058W TDA2P40045 126 aa2.82□□□□□ -1.96
SHP1YBL058W YNL198CP40166 100 aa2.82□□□□□ -1.96
SHP1YBL058W GLC8P41818 229 aa2.82□□□□□ -1.96
SHP1YBL058W SKI6P46948 246 aaPredicted RBP2.82□□□□□ -1.96
SHP1YBL058W YAL067W-AQ8TGK6 75 aa2.82□□□□□ -1.96
SHP1YBL058W YHL042WP38729 150 aa2.81□□□□□ -1.96
SHP1YBL058W YBR121C-AP0C5L4 52 aa2.78□□□□□ -1.96
SHP1YBL058W YBR016WP38216 128 aa2.77□□□□□ -1.97
SHP1YBL058W PBI2P0CT04 75 aaKnown RBP2.76□□□□□ -1.97
SHP1YBL058W YLR255CO13574 117 aa2.75□□□□□ -1.97
SHP1YBL058W ATP20Q12233 115 aa2.75□□□□□ -1.97
SHP1YBL058W RAD6P06104 172 aa2.74□□□□□ -1.97
SHP1YBL058W LIP1Q03579 150 aa2.74□□□□□ -1.97
SHP1YBL058W YPR170W-BP0C5R9 85 aa2.73□□□□□ -1.97
SHP1YBL058W YML054C-AQ3E809 52 aa2.73□□□□□ -1.97
SHP1YBL058W RPA12P32529 125 aaKnown RBP2.71□□□□□ -1.98
SHP1YBL058W YBL008W-AQ3E821 79 aa2.68□□□□□ -1.98
SHP1YBL058W YGR039WP53225 103 aa2.63□□□□□ -1.99
SHP1YBL058W YGR146C-AQ8TGT9 53 aa2.63□□□□□ -1.99
SHP1YBL058W COX8P04039 78 aa2.62□□□□□ -1.99
SHP1YBL058W YCR085WP25650 117 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms