RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W RPS28AQ3E7X9 67 aaPredicted RBP4.49□□□□□ -1.69
SWD1YAR003W YFL041W-AQ3E817 63 aa4.49□□□□□ -1.69
SWD1YAR003W IGD1P43598 195 aa4.48□□□□□ -1.69
SWD1YAR003W LCL1Q02786 101 aa4.48□□□□□ -1.69
SWD1YAR003W YCR085WP25650 117 aa4.47□□□□□ -1.69
SWD1YAR003W YDR119W-AQ2V2P9 66 aa4.47□□□□□ -1.69
SWD1YAR003W YLR307C-AQ3E825 87 aa4.47□□□□□ -1.69
SWD1YAR003W YOR034C-AQ3E735 80 aa4.46□□□□□ -1.7
SWD1YAR003W YNL042W-BQ3E7Z2 85 aa4.45□□□□□ -1.7
SWD1YAR003W YGL193CP53097 103 aa4.44□□□□□ -1.7
SWD1YAR003W MMS2P53152 137 aa4.44□□□□□ -1.7
SWD1YAR003W YJL127C-BQ3E828 52 aa4.44□□□□□ -1.7
SWD1YAR003W YLR236CA0A023PZG4 107 aa4.43□□□□□ -1.7
SWD1YAR003W FYV5P25585 152 aa4.43□□□□□ -1.7
SWD1YAR003W GIS2P53849 153 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SWD1YAR003W YBR230W-AQ3E762 66 aa4.43□□□□□ -1.7
SWD1YAR003W MDN1Q12019 4910 aaKnown RBP4.42□□□□□ -1.7
SWD1YAR003W SBH1P52870 82 aa4.42□□□□□ -1.7
SWD1YAR003W DDR2P89113 61 aa4.42□□□□□ -1.7
SWD1YAR003W COF1Q03048 143 aaKnown RBP4.42□□□□□ -1.7
SWD1YAR003W SPT4P32914 102 aaPredicted RBP4.41□□□□□ -1.7
SWD1YAR003W SFT1P43682 97 aa4.41□□□□□ -1.7
SWD1YAR003W SKI6P46948 246 aaPredicted RBP4.41□□□□□ -1.7
SWD1YAR003W MPC3P53311 146 aa4.4□□□□□ -1.71
SWD1YAR003W TSC3Q3E790 80 aa4.4□□□□□ -1.71
SWD1YAR003W YHR139C-AO13536 103 aa4.39□□□□□ -1.71
SWD1YAR003W TOM6P33448 61 aa4.39□□□□□ -1.71
SWD1YAR003W MSA2P36157 363 aa4.39□□□□□ -1.71
SWD1YAR003W YHL042WP38729 150 aa4.39□□□□□ -1.71
SWD1YAR003W BET1P22804 142 aa4.38□□□□□ -1.71
SWD1YAR003W DSE2P38844 325 aa4.38□□□□□ -1.71
SWD1YAR003W KTI11Q3E840 82 aa4.38□□□□□ -1.71
SWD1YAR003W YJR107C-AP0CT86 78 aa4.37□□□□□ -1.71
SWD1YAR003W YLR156WP0CE96 114 aa4.36□□□□□ -1.71
SWD1YAR003W YLR159WP0CE97 114 aa4.36□□□□□ -1.71
SWD1YAR003W YLR161WP0CE98 114 aa4.36□□□□□ -1.71
SWD1YAR003W YCR050CP25630 102 aa4.36□□□□□ -1.71
SWD1YAR003W BSC4P53841 131 aa4.36□□□□□ -1.71
SWD1YAR003W YPL038W-AQ3E7B4 63 aa4.36□□□□□ -1.71
SWD1YAR003W SPG1P50088 95 aa4.34□□□□□ -1.71
SWD1YAR003W SHH4Q06236 168 aa4.34□□□□□ -1.71
SWD1YAR003W YOR072WQ08486 104 aa4.34□□□□□ -1.71
SWD1YAR003W YGR121W-AQ3E816 71 aa4.34□□□□□ -1.71
SWD1YAR003W EDC2P40023 145 aaPredicted RBP4.33□□□□□ -1.72
SWD1YAR003W YHR007C-AQ07074 71 aa4.33□□□□□ -1.72
SWD1YAR003W YLR412C-AQ3E742 68 aa4.33□□□□□ -1.72
SWD1YAR003W RPL36BO14455 100 aaKnown RBP4.32□□□□□ -1.72
SWD1YAR003W YHL018WP38744 120 aaPredicted RBP4.32□□□□□ -1.72
SWD1YAR003W ATP18P81450 59 aa4.32□□□□□ -1.72
SWD1YAR003W YDR381C-AQ3E6R5 114 aa4.32□□□□□ -1.72
SWD1YAR003W PBI2P0CT04 75 aaKnown RBP4.31□□□□□ -1.72
SWD1YAR003W YGL149WP53116 101 aa4.31□□□□□ -1.72
SWD1YAR003W DDR48P18899 430 aaKnown RBP4.3□□□□□ -1.72
SWD1YAR003W YFL067WP43537 175 aa4.3□□□□□ -1.72
SWD1YAR003W YJR085CP47131 105 aaKnown RBP4.3□□□□□ -1.72
SWD1YAR003W YGR164WP53291 111 aa4.29□□□□□ -1.72
SWD1YAR003W YOR268CQ08734 132 aa4.29□□□□□ -1.72
SWD1YAR003W YSY6P38374 65 aa4.28□□□□□ -1.72
SWD1YAR003W EMC6Q12431 108 aa4.28□□□□□ -1.72
SWD1YAR003W KSH1Q8TGJ3 72 aa4.28□□□□□ -1.72
SWD1YAR003W YER175W-AQ8TGU4 54 aa4.28□□□□□ -1.72
SWD1YAR003W YKL183C-AQ3E765 70 aa4.27□□□□□ -1.73
SWD1YAR003W YFR009W-AP0C5M9 85 aa4.26□□□□□ -1.73
SWD1YAR003W YER187WP40102 141 aa4.25□□□□□ -1.73
SWD1YAR003W RSM19P53733 91 aaPredicted RBP4.25□□□□□ -1.73
SWD1YAR003W TDA2P40045 126 aa4.24□□□□□ -1.73
SWD1YAR003W YNL277W-AQ3E7Z0 62 aa4.24□□□□□ -1.73
SWD1YAR003W YHR213W-BQ8TGK1 99 aa4.24□□□□□ -1.73
SWD1YAR003W ICS3P47034 131 aa4.23□□□□□ -1.73
SWD1YAR003W RSM18P40033 138 aa4.22□□□□□ -1.73
SWD1YAR003W RPL38P49167 78 aaKnown RBP4.22□□□□□ -1.73
SWD1YAR003W YJL133C-AQ3E7A3 74 aa4.22□□□□□ -1.73
SWD1YAR003W YMR230W-AQ3E7B5 62 aa4.22□□□□□ -1.73
SWD1YAR003W TDA8Q6B2U8 126 aa4.22□□□□□ -1.73
SWD1YAR003W YLR157W-DP0CE99 70 aa4.2□□□□□ -1.74
SWD1YAR003W YBR027CP38220 110 aa4.2□□□□□ -1.74
SWD1YAR003W COX23P38824 151 aa4.2□□□□□ -1.74
SWD1YAR003W YDR010CQ12426 110 aa4.2□□□□□ -1.74
SWD1YAR003W AIM4P38305 123 aaPredicted RBP4.19□□□□□ -1.74
SWD1YAR003W YDR246W-AQ3E763 66 aa4.19□□□□□ -1.74
SWD1YAR003W ECM19Q06011 112 aa4.18□□□□□ -1.74
SWD1YAR003W YLR285C-AQ3E771 56 aa4.18□□□□□ -1.74
SWD1YAR003W YLR162WQ06235 118 aa4.17□□□□□ -1.74
SWD1YAR003W EDC1P53080 175 aaPredicted RBP4.16□□□□□ -1.74
SWD1YAR003W MIC10Q96VH5 97 aa4.16□□□□□ -1.74
SWD1YAR003W YOL097W-AQ3E7Y9 61 aa4.15□□□□□ -1.75
SWD1YAR003W ATP20Q12233 115 aa4.14□□□□□ -1.75
SWD1YAR003W YJL197C-AP0C5P0 93 aa4.12□□□□□ -1.75
SWD1YAR003W YEL045CP32616 141 aa4.12□□□□□ -1.75
SWD1YAR003W YOL014WQ08110 124 aa4.11□□□□□ -1.75
SWD1YAR003W YHL005CP38752 130 aa4.1□□□□□ -1.75
SWD1YAR003W YCR043CP25361 127 aa4.09□□□□□ -1.75
SWD1YAR003W YOR314WQ12506 109 aa4.08□□□□□ -1.76
SWD1YAR003W COX7P10174 60 aa4.07□□□□□ -1.76
SWD1YAR003W YOR381W-AQ3E804 55 aa4.07□□□□□ -1.76
SWD1YAR003W YDR182W-AQ3E796 67 aa4.06□□□□□ -1.76
SWD1YAR003W RPL36AP05745 100 aaPredicted RBP4.05□□□□□ -1.76
SWD1YAR003W NOP10Q6Q547 58 aaPredicted RBP4.05□□□□□ -1.76
SWD1YAR003W YAR064WP39563 99 aa4.04□□□□□ -1.76
SWD1YAR003W HHF1P02309 103 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms