RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 MAN1C1Q9NR34 630 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 VPS45Q9NRW7 570 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 NCKIPSDQ9NZQ3 722 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 WRAP73Q9P2S5 460 aaPredicted RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 SUGT1Q9Y2Z0 365 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 IGLV3-22A0A075B6J6 115 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 MIF4GDA9UHW6 222 aaKnown RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 TBX3O15119 743 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 THAP12O43422 761 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 RSL1D1O76021 490 aaKnown RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 ATP6V1B1P15313 513 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 STAT1P42224 750 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT6CP48668 564 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 MARCKSL1P49006 195 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 CYP2J2P51589 502 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 MYBPC1Q00872 1141 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 PPATQ06203 517 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 TMED2Q15363 201 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 MAPK6Q16659 721 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 CCDC137Q6PK04 289 aaKnown RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 FBXO11Q86XK2 927 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 ANKMY2Q8IV38 441 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 TERB1Q8NA31 727 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 SLC20A1Q8WUM9 679 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 RFFLQ8WZ73 363 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 MAML1Q92585 1016 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 ALG3Q92685 438 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 AMNQ9BXJ7 453 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 NUF2Q9BZD4 464 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 INTS2Q9H0H0 1204 aaKnown RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 GLT8D2Q9H1C3 349 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 PPCSQ9HAB8 311 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 CNGB3Q9NQW8 809 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 TMOD2Q9NZR1 351 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 NYAP2Q9P242 653 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 DNAJC12Q9UKB3 198 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 GTF3C4Q9UKN8 822 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 POLIQ9UNA4 740 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 TMA7Q9Y2S6 64 aaKnown RBP7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 ZNF536O15090 1300 aa7.8□□□□□ -1.16
TRIM49B-202ENST00000622138 COL11A2P13942 1736 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 SCN9AQ15858 1988 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 GTPBP10A4D1E9 387 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 KLRG2A4D1S0 409 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 B2RBV5 119 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 F5H6K3 240 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 H3BRJ5 948 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 DNAJA2O60884 412 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 ZBTB11O95625 1053 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT75O95678 551 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CHEK2O96017 543 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TFPTP0C1Z6 253 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 RBP3P10745 1247 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 ADRA2BP18089 450 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CIITAP33076 1130 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 FMO5P49326 533 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 UBXN2AP68543 259 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 DLG4P78352 724 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 PDE1CQ14123 709 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TNIP1Q15025 636 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 DLGAP5Q15398 846 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TRIP10Q15642 601 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 PLEKHG4Q58EX7 1191 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 SEL1L2Q5TEA6 688 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 LPCAT4Q643R3 524 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 KAZNQ674X7 775 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 NEK10Q6ZWH5 1172 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 C1orf186Q6ZWK4 172 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 UBE2Q1Q7Z7E8 422 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TTC30AQ86WT1 665 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CPNE8Q86YQ8 564 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 FAM20CQ8IXL6 584 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 SP8Q8IXZ3 490 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 ELMOD1Q8N336 334 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CPSF7Q8N684 471 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 PRELID2Q8N945 189 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 RFWD2Q8NHY2 731 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 DCUN1D1Q96GG9 259 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CFAP57Q96MR6 1250 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 RANBP9Q96S59 729 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CENPOQ9BU64 300 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TDRD1Q9BXT4 1180 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 THAP2Q9H0W7 228 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 MOV10Q9HCE1 1003 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 OLFML3Q9NRN5 406 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 DNAJC17Q9NVM6 304 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 NINJ2Q9NZG7 142 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 CHORDC1Q9UHD1 332 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TLL2Q9Y6L7 1015 aa7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 ZNF646O15015 1829 aaPredicted RBP7.79□□□□□ -1.16
TRIM49B-202ENST00000622138 TISP43B9A030 160 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 GOLGA8MH3BSY2 632 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 KPNA4O00629 521 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 FCHO1O14526 889 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms