RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PTPRN2Q92932 1015 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 CPB2Q96IY4 423 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 DEFB129Q9H1M3 183 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 GEMIN8Q9NWZ8 242 aaKnown RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 AURKCQ9UQB9 309 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ROBO3Q96MS0 1386 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 ADCY3O60266 1144 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 HBP1O60381 514 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 TLR2O60603 784 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 GLRA3O75311 464 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 AQP5P55064 265 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 PPATQ06203 517 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 SNAPC2Q13487 334 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 PDK2Q15119 407 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 AMHR2Q16671 573 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 BOLA3Q53S33 107 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 FOXR2Q6PJQ5 311 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 NIPA1Q7RTP0 329 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 MAP4K3Q8IVH8 894 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 ATPAF2Q8N5M1 289 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 OR6P1Q8NGX9 317 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 PARK7Q99497 189 aaKnown RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 AVENQ9NQS1 362 aaPredicted RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 TAGLN3Q9UI15 199 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 BCL9LQ86UU0 1499 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 hCG_2014768A0A024R1R8 64 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 TCN1P20061 433 aaPredicted RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 PATL1Q86TB9 770 aaKnown RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 GALNT4Q8N4A0 578 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 ZCCHC9Q8N567 271 aaKnown RBP8.65□□□□□ -1.03
ALMS1-208ENST00000620466 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 MKL1Q969V6 931 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 DCDC2Q9UHG0 476 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 CDY2AQ9Y6F7 541 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 CDY1Q9Y6F8 540 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 ABCC6O95255 1503 aa8.65□□□□□ -1.03
ALMS1-208ENST00000620466 PRRG1O14668 218 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 MAGEB2O15479 319 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 PPP1R11O60927 126 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SRP72O76094 671 aaKnown RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SEC24DO94855 1032 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 BLVRAP53004 296 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 IDI2Q9BXS1 227 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ARHGEF38Q9NXL2 777 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ADAMTS3O15072 1205 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ETS1P14921 441 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 AVPR1AP37288 418 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 HSD17B4P51659 736 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SLC20A2Q08357 652 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ZBTB17Q13105 803 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 BMPR2Q13873 1038 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 QPCTQ16769 361 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 MFSD7Q6UXD7 560 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SLC26A11Q86WA9 606 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC6Q86X45 466 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 TCP10LQ8TDR4 215 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF669Q96BR6 464 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SALL4Q9UJQ4 1053 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 GGA2Q9UJY4 613 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SHOC2Q9UQ13 582 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SH3BP1Q9Y3L3 701 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 OPLAHO14841 1288 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 HSPA1AP0DMV8 641 aaKnown RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 HSPA1BP0DMV9 641 aaKnown RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 DPEP1P16444 411 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 RPA3P35244 121 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 RANBP1P43487 201 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 BMT2Q1RMZ1 405 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 EFHC1Q5JVL4 640 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 C16orf87Q6PH81 154 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ADCK2Q7Z695 626 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 KATNAL2Q8IYT4 538 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 RASGEF1CQ8N431 466 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 CCDC90BQ9GZT6 254 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 VPS33BQ9H267 617 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 NSMCE4AQ9NXX6 385 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ERAP1Q9NZ08 941 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ZSCAN5DPP0CG00 497 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SLURP2P0DP57 97 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 AKT1P31749 480 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 SV2CQ496J9 727 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 IL31Q6EBC2 164 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 PRELID2Q8N945 189 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 CKAP2Q8WWK9 683 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF606Q8WXB4 792 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 TMEM176AQ96HP8 235 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 DCLRE1BQ9H816 532 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.64□□□□□ -1.03
ALMS1-208ENST00000620466 DNAJC16Q9Y2G8 782 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 CD4P01730 458 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 IL10P22301 178 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 WASHC2DQ5SRD0 308 aa8.64□□□□□ -1.03
ALMS1-208ENST00000620466 STKLD1Q8NE28 680 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms