RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 SLC5A9Q2M3M2 681 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 C10orf62Q5T681 223 aaPredicted RBP4.17□□□□□ -1.74
MALAT1-216ENST00000620465 SLC9A4Q6AI14 798 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 ZNF551Q7Z340 670 aaPredicted RBP4.17□□□□□ -1.74
MALAT1-216ENST00000620465 MRGPRGQ86SM5 289 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 CAND1Q86VP6 1230 aaKnown RBP4.17□□□□□ -1.74
MALAT1-216ENST00000620465 SKAP1Q86WV1 359 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 LDLRAD3Q86YD5 345 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 CCDC28AQ8IWP9 274 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 GLIS1Q8NBF1 620 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 POF1BQ8WVV4 589 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 MUL1Q969V5 352 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 RSPRY1Q96DX4 576 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 GDF15Q99988 308 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 PCDHAC1Q9H158 963 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 AS3MTQ9HBK9 375 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 NECTIN3Q9NQS3 549 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 TMOD4Q9NZQ9 345 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 VPS51Q9UID3 782 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 PACSIN3Q9UKS6 424 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 SLC39A10Q9ULF5 831 aa4.17□□□□□ -1.74
MALAT1-216ENST00000620465 DRG1Q9Y295 367 aaKnown RBP4.17□□□□□ -1.74
MALAT1-216ENST00000620465 COL4A3Q01955 1670 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ZAR1LA6NP61 321 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 LINC00473A8K010 186 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 PSMD9O00233 223 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 CCNT2O60583 730 aaKnown RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 VNN1O95497 513 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 TTLL1O95922 423 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 FSHBP01225 129 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 GCP02774 474 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ERBB2P04626 1255 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 EBLN1P0CF75 366 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 GATMP50440 423 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 PDE1AP54750 535 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ICA1Q05084 483 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 FSTL1Q12841 308 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 KLF10Q13118 480 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ZNF169Q14929 603 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 KRT72Q14CN4 511 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 MAPKAPK3Q16644 382 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ERCC6LQ2NKX8 1250 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ARL6IP4Q66PJ3 421 aaKnown RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 PGBD2Q6P3X8 592 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 KIAA0408Q6ZU52 694 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 WDR53Q7Z5U6 358 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 LRRC71Q8N4P6 559 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 MBD3L2Q8NHZ7 208 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 XAGE5Q8WWM1 108 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 C18orf8Q96DM3 657 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 PDLIM2Q96JY6 352 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ZBTB45Q96K62 511 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 HIST1H2AAQ96QV6 131 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 PSMD1Q99460 953 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ARPC5LQ9BPX5 153 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 SCAND2PQ9GZW5 306 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 TRIM36Q9NQ86 728 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ARHGEF3Q9NR81 526 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 CCNL1Q9UK58 526 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 RIMKLBQ9ULI2 386 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 ZMYND8Q9ULU4 1186 aaPredicted RBP4.16□□□□□ -1.74
MALAT1-216ENST00000620465 GABRQQ9UN88 632 aa4.16□□□□□ -1.74
MALAT1-216ENST00000620465 A0A087X1B8 175 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 GOLGA6L3A6NEY3 463 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 GCOM1H8Y6P7 765 aaPredicted RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 M0R3H8 397 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 FFAR2O15552 330 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 SKAP2O75563 359 aaPredicted RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 PRKCBP05771 671 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 DLDP09622 509 aaKnown RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 ARP10275 920 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 CD19P15391 556 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 NDUFB7P17568 137 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 NTSR1P30989 418 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 CXCR5P32302 372 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 TIRAPP58753 221 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 DPTQ07507 201 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 NSUN2Q08J23 767 aaKnown RBP eCLIP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 CLCA4Q14CN2 919 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 RAB30Q15771 203 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 RAP1GAP2Q684P5 730 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 USP49Q70CQ1 688 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 GRASPQ7Z6J2 395 aaPredicted RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 RAB11FIP4Q86YS3 637 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 ZNF527Q8NB42 609 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 RP9Q8TA86 221 aaKnown RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 ABHD5Q8WTS1 349 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 DPCDQ9BVM2 203 aaPredicted RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 PCED1AQ9H1Q7 454 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 FOXJ2Q9P0K8 574 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 STEAP1Q9UHE8 339 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 ING1Q9UK53 422 aaPredicted RBP4.15□□□□□ -1.75
MALAT1-216ENST00000620465 SALL3Q9BXA9 1300 aa4.15□□□□□ -1.75
MALAT1-216ENST00000620465 SCRIBQ14160 1630 aa4.14□□□□□ -1.75
MALAT1-216ENST00000620465 AGPSO00116 658 aa4.14□□□□□ -1.75
MALAT1-216ENST00000620465 EXOC5O00471 708 aa4.14□□□□□ -1.75
MALAT1-216ENST00000620465 TJP3O95049 919 aa4.14□□□□□ -1.75
MALAT1-216ENST00000620465 VIPP01282 170 aa4.14□□□□□ -1.75
MALAT1-216ENST00000620465 PECAM1P16284 738 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms