RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 FAM90A13PP0C7W8 464 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 FAM90A24PP0C7X0 464 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 ATF7P17544 494 aaPredicted RBP3.66□□□□□ -1.82
TARDBP-220ENST00000618606 THBS4P35443 961 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 LMAN2Q12907 356 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CTBP1Q13363 440 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CCNIQ14094 377 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 SEMA3AQ14563 771 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 PTCHD3Q3KNS1 767 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 PLA1AQ53H76 456 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 LMBRD2Q68DH5 695 aaPredicted RBP3.66□□□□□ -1.82
TARDBP-220ENST00000618606 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 PTCHD4Q6ZW05 846 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 UBE2Q1Q7Z7E8 422 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 BPIFB1Q8TDL5 484 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 TMEM171Q8WVE6 324 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 KBTBD7Q8WVZ9 684 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CHMP4CQ96CF2 233 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 TRIM54Q9BYV2 358 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 GBA2Q9HCG7 927 aaPredicted RBP3.66□□□□□ -1.82
TARDBP-220ENST00000618606 XPNPEP3Q9NQH7 507 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CNNM1Q9NRU3 951 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 PRSS44E7EML9 344 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 APEHP13798 732 aaKnown RBP3.65□□□□□ -1.83
TARDBP-220ENST00000618606 PRKAG1P54619 331 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 BCAT1P54687 386 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 SUMO2P61956 95 aaKnown RBP3.65□□□□□ -1.83
TARDBP-220ENST00000618606 RAB1AP62820 205 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 CFHR1Q03591 330 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 ZNF91Q05481 1191 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 LARS2Q15031 903 aaKnown RBP3.65□□□□□ -1.83
TARDBP-220ENST00000618606 CERCAMQ5T4B2 595 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 IGFBPL1Q8WX77 278 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 TRIM5Q9C035 493 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 SLC12A5Q9H2X9 1139 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 POT1Q9NUX5 634 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 TMEM184CQ9NVA4 438 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 HEY2Q9UBP5 337 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 DRG1Q9Y295 367 aaKnown RBP3.65□□□□□ -1.83
TARDBP-220ENST00000618606 ANKRD6Q9Y2G4 727 aa3.65□□□□□ -1.83
TARDBP-220ENST00000618606 BTN3A1O00481 513 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 CTSAP10619 480 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 DIO1P49895 249 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 COPB1P53618 953 aaKnown RBP3.64□□□□□ -1.83
TARDBP-220ENST00000618606 ID2Q02363 134 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 MLC1Q15049 377 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 SEC23BQ15437 767 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 AWAT1Q58HT5 328 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 TMTC4Q5T4D3 741 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 RANBP10Q6VN20 620 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 ZBTB46Q86UZ6 589 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 GRAMD1CQ8IYS0 662 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 ZFYVE19Q96K21 471 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 MS4A7Q9GZW8 240 aaPredicted RBP3.64□□□□□ -1.83
TARDBP-220ENST00000618606 SMURF2Q9HAU4 748 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 ZSCAN32Q9NX65 697 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.64□□□□□ -1.83
TARDBP-220ENST00000618606 LPAR3Q9UBY5 353 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 PROCRQ9UNN8 238 aa3.64□□□□□ -1.83
TARDBP-220ENST00000618606 OFD1O75665 1012 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 TOMM40O96008 361 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 NPR1P16066 1061 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 PRKAR1BP31321 381 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 ME1P48163 572 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 HTR6P50406 440 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 TIRAPP58753 221 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 BRDTQ58F21 947 aaPredicted RBP3.63□□□□□ -1.83
TARDBP-220ENST00000618606 ZNF628Q5EBL2 1059 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 DENND2CQ68D51 928 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 ANO7Q6IWH7 933 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 TMEM65Q6PI78 240 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 ZNF783Q6ZMS7 281 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.63□□□□□ -1.83
TARDBP-220ENST00000618606 OR6B3Q8NGW1 331 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 DIS3LQ8TF46 1054 aaKnown RBP3.63□□□□□ -1.83
TARDBP-220ENST00000618606 RAPGEF4Q8WZA2 1011 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 PCDH12Q9NPG4 1184 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 MGAT4CQ9UBM8 478 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 GABBR1Q9UBS5 961 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 STAP2Q9UGK3 403 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 USP22Q9UPT9 525 aa3.63□□□□□ -1.83
TARDBP-220ENST00000618606 EME2A4GXA9 379 aaPredicted RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 TMEM233B4DJY2 109 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 H3BML4 177 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 GTPBP1O00178 669 aaKnown RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 SMAD6O43541 496 aaKnown RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 SPRY2O43597 315 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 RNF8O76064 485 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 CRYABP02511 175 aaKnown RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 PF4V1P10720 104 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 PSG1P11464 419 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 CREB1P16220 341 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 NCLP19338 710 aaKnown RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 EPHA3P29320 983 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 UQCRC1P31930 480 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
TARDBP-220ENST00000618606 RPS13P62277 151 aaKnown RBP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 TIAL1Q01085 375 aaKnown RBP eCLIP3.62□□□□□ -1.83
TARDBP-220ENST00000618606 CFHR3Q02985 330 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms