RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 RNASEH2BQ5TBB1 312 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CTU1Q7Z7A3 348 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 SUGP1Q8IWZ8 645 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPM1NQ8N819 430 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZFP42Q96MM3 310 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 BCO2Q9BYV7 579 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 TMPRSS4Q9NRS4 437 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ARID2Q68CP9 1835 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM47DPA6NHR8 397 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 A6NJR5 290 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 CREB3O43889 395 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 NUMBP49757 651 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 IL9RQ01113 521 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF268Q14587 947 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCHCR1Q8TD31 782 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 PRCCQ92733 491 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 CNPY3Q9BT09 278 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM167BQ9BTA0 163 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 VTA1Q9NP79 307 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 WDR35Q9P2L0 1181 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRIM33Q9UPN9 1127 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 E2F8A0AVK6 867 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM155BO75949 473 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 SUN1O94901 812 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 SMIM10L2AP0DMW4 78 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 SMIM10L2BP0DMW5 78 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 DESP17661 470 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 ENPEPQ07075 957 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 MORF4L2Q15014 288 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF449Q6P9G9 518 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRPM8Q7Z2W7 1104 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 SPATA21Q7Z572 469 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 NME8Q8N427 588 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCNYQ8ND76 341 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 LRRC8CQ8TDW0 803 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 TTC17Q96AE7 1141 aa12.03□□□□□ -0.48
ARHGEF1-220ENST00000600274 IGFBP6P24592 240 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 LRRC38Q5VT99 294 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 MFSD5Q6N075 450 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 BBS12Q6ZW61 710 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 MAP7D3Q8IWC1 876 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 PYROXD2Q8N2H3 581 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 TMEM40Q8WWA1 233 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.484e-11■■■□□ 16.4
ARHGEF1-220ENST00000600274 PAFAH2Q99487 392 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 SNRNP25Q9BV90 132 aaKnown RBP12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 LHX5Q9H2C1 402 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF1-220ENST00000600274 A0A1B0GUA9 196 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 FOXN2P32314 431 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ELF1P32519 619 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ZNF143P52747 638 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 PPP2R5DQ14738 602 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 LVRNQ6Q4G3 990 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 FAM43BQ6ZT52 329 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 SLC35B2Q8TB61 432 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 KLHL14Q9P2G3 628 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ITGA11Q9UKX5 1188 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 TTLL3Q9Y4R7 772 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 LCTP09848 1927 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 UPP2O95045 317 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ITGAVP06756 1048 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 INHBAP08476 426 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 PHBP35232 272 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 GNL1P36915 607 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ERFP50548 548 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 COPS2P61201 443 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 CRADDP78560 199 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 DPYSL3Q14195 570 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 CCDC14Q49A88 953 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 DCAF6Q58WW2 860 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 IGDCC3Q8IVU1 814 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 ATP11CQ8NB49 1132 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 HASPINQ8TF76 798 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 RSAD1Q9HA92 442 aa12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 GBA2Q9HCG7 927 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-220ENST00000600274 C3orf70A6NLC5 250 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 APOC4-APOC2K7ER74 178 aa12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 APOL1O14791 398 aa12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 PAPSS1O43252 624 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 SNX3O60493 162 aa12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 APOC2P02655 101 aa12.01□□□□□ -0.49
ARHGEF1-220ENST00000600274 GTF2A2P52657 109 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms