RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ASAH2Q9NR71 780 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
TGFB1-204ENST00000600196 ADAM22Q9P0K1 906 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 CLEC1BQ9P126 229 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 A0A087X0T9 212 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 FTLP02792 175 aaPredicted RBP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 FAM228BP0C875 321 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 TKTL1P51854 596 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 MRPS5P82675 430 aaKnown RBP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 NAA35Q5VZE5 725 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 TMEM139Q8IV31 216 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 MYLIPQ8WY64 445 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 MCRS1Q96EZ8 462 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 CHP1Q99653 195 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 LRRC3Q9BY71 257 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 S1PR5Q9H228 398 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 IGFLR1Q9H665 355 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 OLA1Q9NTK5 396 aaKnown RBP12.92□□□□□ -0.34
TGFB1-204ENST00000600196 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
TGFB1-204ENST00000600196 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 HSF2BPO75031 334 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 NDUFA10O95299 355 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 F11P03951 625 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 ERBB2P04626 1255 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CFHP08603 1231 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 H2AFZP0C0S5 128 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 RALAP11233 206 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 LTBRP36941 435 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 DAOAP59103 153 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 GPC5P78333 572 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SLC6A3Q01959 620 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 PTP4A2Q12974 167 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 ACAP1Q15027 740 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CCDC142Q17RM4 750 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 PLEKHA7Q6IQ23 1121 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 H2AFVQ71UI9 128 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 MON1BQ7L1V2 547 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 TTC9BQ8N6N2 239 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SMRP1Q8NCR6 262 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 HLA-CQ95604 372 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CPXM1Q96SM3 734 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 PIDD1Q9HB75 910 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 ABCC13Q9NSE7 274 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
TGFB1-204ENST00000600196 PARVAQ9NVD7 372 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CLDND1Q9NY35 253 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.91□□□□□ -0.34
TGFB1-204ENST00000600196 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 CD207Q9UJ71 328 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
TGFB1-204ENST00000600196 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 SIGLEC16A6NMB1 481 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 E5RJQ4 531 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 PAPSS1O43252 624 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 RHOP08100 348 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 PLEKP08567 350 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 TMEM253P0C7T8 217 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 DESP17661 470 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 YWHAZP63104 245 aaKnown RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 TAF10Q12962 218 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 AAK1Q2M2I8 961 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 LEXMQ3ZCV2 418 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 PTPN20Q4JDL3 420 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 ACBD5Q5T8D3 534 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 Q7L0L9 218 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 XYLT1Q86Y38 959 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 RHOT2Q8IXI1 618 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 SUSD6Q92537 303 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 FBXO32Q969P5 355 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 POPDC2Q9HBU9 364 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms