RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CCDC14Q49A88 953 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 PKDCCQ504Y2 493 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 RAB6CQ53S08 254 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 PMF1Q6P1K2 205 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TTC30AQ86WT1 665 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 LRRC52Q8N7C0 313 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TEKT4Q8WW24 435 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 RNF157Q96PX1 679 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 SLC4A5Q9BY07 1137 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 RAB6CQ9H0N0 254 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ACSS3Q9H6R3 686 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 KLC4Q9NSK0 619 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 SSTR1P30872 391 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 SDC4P31431 198 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 FOXN2P32314 431 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ATP11AP98196 1134 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 MTFR1Q15390 333 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 IQSEC1Q6DN90 963 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 SCYL2Q6P3W7 929 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 C3orf62Q6ZUJ4 267 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 C4orf33Q8N1A6 199 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 GBP7Q8N8V2 638 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 USP6NLQ92738 828 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 NCAPGQ9BPX3 1015 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TINF2Q9BSI4 451 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 KIF9Q9HAQ2 790 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 NGRNQ9NPE2 291 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 FAM49BQ9NUQ9 324 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 PPEF2O14830 753 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 TGM2P21980 687 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 GBP2P32456 591 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 TMEM62Q0P6H9 643 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 FAM133BQ5BKY9 247 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 TMEM110Q86TL2 294 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 UNC93AQ86WB7 457 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 FBF1Q8TES7 1133 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 FAM172AQ8WUF8 416 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 TBCBQ99426 244 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 APOL1O14791 398 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 CA4P22748 312 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 EFTUD2Q15029 972 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■■■■ 35.5
PRKCSH-217ENST00000592741 ZDHHC17Q8IUH5 632 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 FUKQ8N0W3 1084 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 OR6B3Q8NGW1 331 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 PAFAH2Q99487 392 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 WDR83Q9BRX9 315 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 EIF2AQ9BY44 585 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 CXCL16Q9H2A7 254 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 SSU72Q9NP77 194 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 PAK5Q9P286 719 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 PRKAG3Q9UGI9 489 aa17.29■□□□□ 0.36
PRKCSH-217ENST00000592741 CFAP69A5D8W1 941 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 GPR32O75388 356 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 MSH2P43246 934 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 PCBP1Q15365 356 aaKnown RBP eCLIP17.28■□□□□ 0.361e-8■■■■□ 22
PRKCSH-217ENST00000592741 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 ARHGAP17Q68EM7 881 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 CGB2Q6NT52 195 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 CYB5D1Q6P9G0 228 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 ADGRD1Q6QNK2 874 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 VSIG1Q86XK7 387 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 DHRS4Q9BTZ2 278 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 TRIM6Q9C030 488 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 PCDH18Q9HCL0 1135 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 KLHL14Q9P2G3 628 aa17.28■□□□□ 0.36
PRKCSH-217ENST00000592741 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 CHADO15335 359 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 UBOX5O94941 541 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 BCAR1P56945 870 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 KCNJ11Q14654 390 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 RGS9BPQ6ZS82 235 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 PLD5Q8N7P1 536 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 C18orf25Q96B23 403 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 OSMRQ99650 979 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 CHMP2BQ9UQN3 213 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 SCN1AP35498 2009 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 TRIP11Q15643 1979 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 NRCAMQ92823 1304 aa17.27■□□□□ 0.36
PRKCSH-217ENST00000592741 A0A1W2PPM1 405 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 MDM4O15151 490 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 PAPSS1O43252 624 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms