RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.33
VAT1-206ENST00000589709 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 NETO1Q8TDF5 533 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 FBXO32Q969P5 355 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 OTUB2Q96DC9 234 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
VAT1-206ENST00000589709 NCOR2Q9Y618 2525 aa12.96□□□□□ -0.34
VAT1-206ENST00000589709 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 K7EQS6 105 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 SLC30A4O14863 429 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 COCHO43405 550 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 AP1G2O75843 785 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 APBB3O95704 486 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 CYP17A1P05093 508 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
VAT1-206ENST00000589709 NR2F2P24468 414 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
VAT1-206ENST00000589709 ASPAP45381 313 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 VAMP7P51809 220 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 NDST1P52848 882 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 DMC1Q14565 340 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 RHBDF2Q6PJF5 856 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 KRBA2Q6ZNG9 492 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 ZMIZ2Q8NF64 920 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 USP33Q8TEY7 942 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 SMOQ99835 787 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 CYP3A43Q9HB55 503 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 PCDHGA5Q9Y5G8 931 aa12.95□□□□□ -0.34
VAT1-206ENST00000589709 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
VAT1-206ENST00000589709 ATG2BQ96BY7 2078 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 CLSTN1O94985 981 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 EPN2O95208 641 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 ADH1CP00326 375 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 CCDC192P0DO97 292 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 SLC5A3P53794 718 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 INCA1Q0VD86 236 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 IFRD2Q12894 506 aaPredicted RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 KBTBD6Q86V97 674 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 SLC2A14Q8TDB8 520 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 ELMO3Q96BJ8 720 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 HHIPQ96QV1 700 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 PNKPQ96T60 521 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 HNRNPABQ99729 332 aaKnown RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 IMPG2Q9BZV3 1241 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
VAT1-206ENST00000589709 POLR3BQ9NW08 1133 aaPredicted RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
VAT1-206ENST00000589709 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 DNAH14Q0VDD8 3507 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.93□□□□□ -0.34
VAT1-206ENST00000589709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.93□□□□□ -0.34
VAT1-206ENST00000589709 BEST1O76090 585 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 ZNF202O95125 648 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 ZNF806P0C7X5 589 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 KRT13P13646 458 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 CCDC130P13994 396 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 GTF2H1P32780 548 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
VAT1-206ENST00000589709 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 ADAM9Q13443 819 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 PLK5Q496M5 336 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 HSF5Q4G112 596 aaPredicted RBP12.93□□□□□ -0.34
VAT1-206ENST00000589709 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 SPOPLQ6IQ16 392 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 FAM186BQ8IYM0 893 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 FAXDC2Q96IV6 333 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 ARRDC1-AS1Q9H2J1 176 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 CCSER2Q9H7U1 834 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 GMIPQ9P107 970 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 MMP17Q9ULZ9 603 aa12.93□□□□□ -0.34
VAT1-206ENST00000589709 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 DCDC2BA2VCK2 349 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 KAT7O95251 611 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 FAM200BP0CF97 657 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
VAT1-206ENST00000589709 ADH5P11766 374 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 GRIA2P42262 883 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 TNFRSF4P43489 277 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 SLC6A11P48066 632 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms