RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TRPM5Q9NZQ8 1165 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 TMEM63CQ9P1W3 806 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 HESX1Q9UBX0 185 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 ZMYM5Q9UJ78 669 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 PCDHB4Q9Y5E5 795 aa8.24□□□□□ -1.09
SMG6-211ENST00000572369 ANAPC1Q9H1A4 1944 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 TRAV19A0A0A6YYK7 116 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 TMEM8BA6NDV4 472 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 HEPACAM2A8MVW5 462 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PMM2O15305 246 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 LETM1O95202 739 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 CKMP06732 381 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 SP9P0CG40 484 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 KRT5P13647 590 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 HMGA1P17096 107 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 NPR3P17342 541 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PSMC3P17980 439 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 CDK11BP21127 795 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 TGM1P22735 817 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 DDX6P26196 483 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG6-211ENST00000572369 YWHAQP27348 245 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 USP8P40818 1118 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 VIPR2P41587 438 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PDE6CP51160 858 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 SLC5A3P53794 718 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 CACNA2D1P54289 1103 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 MFAP3P55082 362 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PFKPQ01813 784 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 EXOC3L4Q17RC7 722 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 VWA3BQ502W6 1294 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 TXNDC8Q6A555 127 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 TMEM270Q6UE05 265 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 C11orf57Q6ZUT1 292 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 IRF2BP1Q8IU81 584 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 ARID3BQ8IVW6 561 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 CMTM8Q8IZV2 173 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 FUKQ8N0W3 1084 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 SIX5Q8N196 739 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 SLC4A11Q8NBS3 891 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PDZD8Q8NEN9 1154 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 ENOX1Q8TC92 643 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 CSGALNACT1Q8TDX6 532 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 WHAMMQ8TF30 809 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 SECISBP2LQ93073 1101 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 MYRFLQ96LU7 910 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 MED15Q96RN5 788 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 RPP25Q9BUL9 199 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 TRMT61BQ9BVS5 477 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 PLA2G2FQ9BZM2 168 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 FAM124BQ9H5Z6 455 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 THG1LQ9NWX6 298 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 CA14Q9ULX7 337 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 HELZP42694 1942 aaKnown RBP8.23□□□□□ -1.09
SMG6-211ENST00000572369 TICRRQ7Z2Z1 1910 aa8.23□□□□□ -1.09
SMG6-211ENST00000572369 PATJQ8NI35 1801 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 NRG2O14511 850 aaPredicted RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 ZNF263O14978 683 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 VDRP11473 427 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 HDCP19113 662 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 SLC9A1P19634 815 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 EEF1GP26641 437 aaKnown RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 GDI1P31150 447 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 PPP3CCP48454 512 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 RAD23BP54727 409 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 USP46P62068 366 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 GPC5P78333 572 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 MYL5Q02045 173 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 GCNT1Q02742 428 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 TYRO3Q06418 890 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 TAF10Q12962 218 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 ARHGAP44Q17R89 818 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 GOLGA7BQ2TAP0 167 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 SKOR2Q2VWA4 1001 aaPredicted RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 ANO6Q4KMQ2 910 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 TCP11X2Q5H9J9 407 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 TRIM65Q6PJ69 517 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 VITQ6UXI7 678 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 CLEC20AQ6ZU45 233 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 PAQR9Q6ZVX9 377 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 ARHGEF19Q8IW93 802 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 MFSD6LQ8IWD5 586 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 CELF5Q8N6W0 485 aaKnown RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 RBBP8NLQ8NC74 664 aaPredicted RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 DEPDC1BQ8WUY9 529 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 DDX1Q92499 740 aaKnown RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 IRF7Q92985 503 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 KAT5Q92993 513 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 FAM81BQ96LP2 452 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 SMOQ99835 787 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 SLC46A2Q9BY10 475 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 NACA2Q9H009 215 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms