RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 RP9Q8TA86 221 aaKnown RBP4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 DEPTORQ8TB45 409 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 CAGE1Q8TC20 777 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 ZNF384Q8TF68 577 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 IPCEF1Q8WWN9 437 aaPredicted RBP4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 REPS1Q96D71 796 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 ZDHHC12Q96GR4 267 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 UROC1Q96N76 676 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 LENG8Q96PV6 779 aaPredicted RBP4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 PRR25Q96S07 402 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 HAPLN3Q96S86 360 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 DUSP26Q9BV47 211 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 VN1R3Q9BXE9 311 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 PCGF6Q9BYE7 350 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 ASB6Q9NWX5 421 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 SLC17A6Q9P2U8 582 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 HPSEQ9Y251 543 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 MAN2B2Q9Y2E5 1009 aa4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 TTBK1Q5TCY1 1321 aaPredicted RBP4.66□□□□□ -1.66
HERPUD1-212ENST00000567944 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 SPRY2O43597 315 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 EBLN1P0CF75 366 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 ARP10275 920 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 EPHA3P29320 983 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PRKAR1BP31321 381 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 ATICP31939 592 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 HSPA7P48741 367 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 ALDH9A1P49189 494 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 GATMP50440 423 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 CCT8P50990 548 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PGDP52209 483 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 COPAP53621 1224 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 MPEG1Q2M385 716 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PLAC9Q5JTB6 97 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 DGKKQ5KSL6 1271 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 TSTD2Q5T7W7 516 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 RAP1GAP2Q684P5 730 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 ANKRD16Q6P6B7 361 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 CRTC1Q6UUV9 634 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 TOGARAM2Q6ZUX3 1019 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PARS2Q7L3T8 475 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 WDR53Q7Z5U6 358 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 MORC1Q86VD1 984 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PRIMA1Q86XR5 153 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 FAM186BQ8IYM0 893 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 XAGE5Q8WWM1 108 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 C18orf8Q96DM3 657 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 MACROD1Q9BQ69 325 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 FSD1LQ9BXM9 530 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 SLITRK6Q9H5Y7 841 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 HEYLQ9NQ87 328 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 ARPP21Q9UBL0 812 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 DNAJB11Q9UBS4 358 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 INSL6Q9Y581 213 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 PCDHGB2Q9Y5G2 931 aa4.65□□□□□ -1.67
HERPUD1-212ENST00000567944 COL11A2P13942 1736 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 GCOM1H8Y6P7 765 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 PLIN1O60240 522 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 PLA2G6O60733 806 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 CBFA2T3O75081 653 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 PMPCBO75439 489 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 IFIT2P09913 472 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 FAM163BP0C2L3 166 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 MYL4P12829 197 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 ENGP17813 658 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 ABCB4P21439 1286 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 EEF1GP26641 437 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 GKP32189 559 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 IL6STP40189 918 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 PDE1AP54750 535 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 PSG6Q00889 435 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 E2F1Q01094 437 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 AARS2Q5JTZ9 985 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 GRASPQ7Z6J2 395 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 LRRC71Q8N4P6 559 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 CYP2W1Q8TAV3 490 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 SARAFQ96BY9 339 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 MAGEB5Q9BZ81 275 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 INO80BQ9C086 356 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 CERS4Q9HA82 394 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 TMEM8AQ9HCN3 771 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 NLRC4Q9NPP4 1024 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 LPAR3Q9UBY5 353 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 SERGEFQ9UGK8 458 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 ZNHIT2Q9UHR6 403 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 USP22Q9UPT9 525 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 COL15A1P39059 1388 aa4.64□□□□□ -1.67
HERPUD1-212ENST00000567944 FAM234BA2RU67 622 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 AP4M1O00189 453 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 EXOC5O00471 708 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 PDE8BO95263 885 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 NUDT3O95989 172 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 IGLV2-14P01704 120 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 FPR3P25089 353 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 MST1P26927 711 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 MCM5P33992 734 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 EEFSECP57772 596 aaKnown RBP4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 RHBDL3P58872 404 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms