RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 TRIM49D1C9J1S8 452 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 NFIBO00712 420 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 SNNO75324 88 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 STBD1O95210 358 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 ABCD1P33897 745 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 NLRP11P59045 1033 aaKnown RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 DYNLT1P63172 113 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 KDSRQ06136 332 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 ZNF518BQ9C0D4 1074 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 MIS12Q9H081 205 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 EPB41L1Q9H4G0 881 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 CCPG1Q9ULG6 757 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 ARID2Q68CP9 1835 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 H0YCG3 227 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 CREB3O43889 395 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 SNRPAP09012 282 aaKnown RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 AOC1P19801 751 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 KDELR1P24390 212 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 TMPRSS15P98073 1019 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 WASHC5Q12768 1159 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 DHDDSQ86SQ9 333 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 NAT14Q8WUY8 206 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 ACAP3Q96P50 834 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 IQCGQ9H095 443 aaKnown RBP16.33■□□□□ 0.2
COMMD4-215ENST00000566843 PHF24Q9UPV7 400 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 TTLL3Q9Y4R7 772 aa16.33■□□□□ 0.2
COMMD4-215ENST00000566843 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 SDR42E2A6NKP2 422 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 CCNT2O60583 730 aaKnown RBP16.32■□□□□ 0.2
COMMD4-215ENST00000566843 KRT7P08729 469 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 WEE2P0C1S8 567 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 UQCRBP14927 111 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 AQP5P55064 265 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
COMMD4-215ENST00000566843 ASPHQ12797 758 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 KCNJ11Q14654 390 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 NME8Q8N427 588 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 ARFGAP1Q8N6T3 406 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-215ENST00000566843 KCNN1Q92952 543 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 CGRRF1Q99675 332 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 MECRQ9BV79 373 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 IRAK4Q9NWZ3 460 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 AGO2Q9UKV8 859 aaKnown RBP16.32■□□□□ 0.2
COMMD4-215ENST00000566843 SOX13Q9UN79 622 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 HBS1LQ9Y450 684 aaKnown RBP16.32■□□□□ 0.2
COMMD4-215ENST00000566843 WDR81Q562E7 1941 aa16.32■□□□□ 0.2
COMMD4-215ENST00000566843 PRR5-ARHGAP8B1AHC4 643 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 LIG4P49917 911 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 ARHGAP8P85298 464 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 MSLNQ13421 630 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 MTM1Q13496 603 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 CHI3L2Q15782 390 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 CC2D2BQ6DHV5 1058 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 RASSF3Q86WH2 238 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 CRLF3Q8IUI8 442 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 WDTC1Q8N5D0 677 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 MCPH1Q8NEM0 835 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 XPNPEP1Q9NQW7 623 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 TMCO1Q9UM00 188 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 SMIM31A0A1B0GVY4 71 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 RFPL1O75677 317 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 KRT37O76014 449 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 IL1R2P27930 398 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 GRIA2P42262 883 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 EIF3EP60228 445 aaKnown RBP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 BASP1P80723 227 aaKnown RBP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 PDE1BQ01064 536 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 SFT2D3Q587I9 215 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 RNF111Q6ZNA4 994 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 TAB3Q8N5C8 712 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 FAM71DQ8N9W8 422 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-215ENST00000566843 NDUFA13Q9P0J0 144 aa16.31■□□□□ 0.2
COMMD4-215ENST00000566843 APOC4-APOC2K7ER74 178 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 BIRC5O15392 142 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 AP1G1O43747 822 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 ATP9BO43861 1147 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 LRCH4O75427 683 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 APOC2P02655 101 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 CAP2P40123 477 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 ACOT2P49753 483 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 MED21Q13503 144 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 HIC1Q14526 733 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 GSTCDQ8NEC7 633 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 SIKE1Q9BRV8 207 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms