RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	PCCA	P05165	728 aa	Predicted RBP	4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	GMFB	P60983	142 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	ZFP69	Q49AA0	526 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	FAM228A	Q86W67	206 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	FAF2	Q96CS3	445 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	ZBTB18	Q99592	522 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	CHD2	O14647	1828 aa	Known RBP	4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	ITGB3	P05106	788 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	P4HB	P07237	508 aa	Known RBP	4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	CSE1L	P55060	971 aa	Known RBP	4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	NDUFAF2	Q8N183	169 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	CLEC4F	Q8N1N0	589 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	XXYLT1	Q8NBI6	393 aa		4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.4	□□□□□ -1.7
MACF1-231	ENST00000564288	APOL3	O95236	402 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PDE8B	O95263	885 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM122C	Q6P4D5	195 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	KLHDC10	Q6PID8	442 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PAGE2	Q7Z2X7	111 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PACRGL	Q8N7B6	248 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	NCSTN	Q92542	709 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	HES6	Q96HZ4	224 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZFYVE19	Q96K21	471 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CNDP2	Q96KP4	475 aa	Known RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM168	Q9H0V1	697 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	FBP2	O00757	339 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	GNB5	O14775	395 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	DDHD2	O94830	711 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ADAM17	P78536	824 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	DYRK4	Q9NR20	520 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKRD26	Q9UPS8	1709 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	OXSR1	O95747	527 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	UMPS	P11172	480 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	MAPRE1	Q15691	268 aa	Known RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PAGE2B	Q5JRK9	111 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	SNRNP48	Q6IEG0	339 aa	Known RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	UGT2B28	Q9BY64	529 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	JMJD4	Q9H9V9	463 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	LDLR	P01130	860 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	TXNRD1	Q16881	649 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	RAPH1	Q70E73	1250 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	FBXO25	Q8TCJ0	367 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PAK5	Q9P286	719 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZBBX	A8MT70	800 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	FOXN3	O00409	490 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	GNPAT	O15228	680 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PTGS2	P35354	604 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	NT5DC3	Q86UY8	548 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	MARVELD2	Q8N4S9	558 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	SEC14L1	Q92503	715 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF232	Q9UNY5	417 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PNMA6F	A0A0J9YX94	578 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PLK4	O00444	970 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	MEIS1	O00470	390 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	RPS17	P08708	135 aa	Known RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	IKBIP	Q70UQ0	350 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	MTG1	Q9BT17	334 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF532	Q9HCE3	1301 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CCNK	O75909	580 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	KPNA1	P52294	538 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	DAB2	P98082	770 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CDC42EP1	Q00587	391 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	C11orf63	Q6NUN7	778 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	KLHL35	Q6PF15	583 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	C12orf56	Q8IXR9	622 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	VPS37A	Q8NEZ2	397 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	HSPH1	Q92598	858 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	POLR1B	Q9H9Y6	1135 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	INTS13	Q9NVM9	706 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZDHHC7	Q9NXF8	308 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ARHGEF38	Q9NXL2	777 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	RASA1	P20936	1047 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	COMT	P21964	271 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	HACE1	Q8IYU2	909 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CNDP1	Q96KN2	507 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	C7orf26	Q96N11	449 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	GNE	Q9Y223	722 aa	Known RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF544	Q6NX49	715 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	TBX10	O75333	385 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PGM3	O95394	542 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	FBLN1	P23142	703 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	PHKA2	P46019	1235 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGA8	P53708	1063 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP4A11	Q02928	519 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	UGP2	Q16851	508 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	EPC2	Q52LR7	807 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP4A22	Q5TCH4	519 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288		Q6ZNX1	250 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	GOLM1	Q8NBJ4	401 aa		4.4	□□□□□ -1.71
MACF1-231	ENST00000564288	BMP10	O95393	424 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GLYCTK	Q8IVS8	523 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TOM1	O60784	492 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PROC	P04070	461 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	VAMP7	P51809	220 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CAPRIN1	Q14444	709 aa	Known RBP	4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms