RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GRIA2P42262 883 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 WASP42768 502 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 RPL6Q02878 288 aaKnown RBP11.08□□□□□ -0.64
SF3B3-204ENST00000563739 GRIK2Q13002 908 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 NR1H3Q13133 447 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 EOGTQ5NDL2 527 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 LMBRD2Q68DH5 695 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-204ENST00000563739 TOGARAM2Q6ZUX3 1019 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 TOP6BLQ8N6T0 577 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 TERB1Q8NA31 727 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 OR5B17Q8NGF7 314 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 RAD54LQ92698 747 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 ERLEC1Q96DZ1 483 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 SYT15Q9BQS2 421 aa11.08□□□□□ -0.64
SF3B3-204ENST00000563739 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
SF3B3-204ENST00000563739 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-204ENST00000563739 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 F8VP50 259 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 AP5Z1O43299 807 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 FAM13AO94988 1023 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 IL18RAPO95256 599 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 APODP05090 189 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 PFKLP17858 780 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 PNPLA4P41247 253 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 TNFRSF4P43489 277 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 NOP14P78316 857 aaKnown RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 GFPT1Q06210 699 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 DENND5BQ6ZUT9 1274 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 USP49Q70CQ1 688 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 NT5DC4Q86YG4 428 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 SPATA2LQ8IUW3 424 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 HDDC3Q8N4P3 179 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 TRIML1Q8N9V2 468 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 CEP76Q8TAP6 659 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 ZNF419Q96HQ0 510 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 GABRG3Q99928 467 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 MTMR12Q9C0I1 747 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 BCCIPQ9P287 314 aaKnown RBP eCLIP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 KCNG1Q9UIX4 513 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-204ENST00000563739 CYP8B1Q9UNU6 501 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 SNX9Q9Y5X1 595 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 MYO18BQ8IUG5 2567 aa11.07□□□□□ -0.64
SF3B3-204ENST00000563739 PRRT4C9JH25 899 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 MAP3K13O43283 966 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 HUS1O60921 280 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 HOXB2P14652 356 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 SCP2P22307 547 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 MAOBP27338 520 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 DPP6P42658 865 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 TFAMQ00059 246 aaKnown RBP11.06□□□□□ -0.64
SF3B3-204ENST00000563739 MYL7Q01449 175 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 TAF10Q12962 218 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 SLC14A1Q13336 389 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 VSTM1Q6UX27 236 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 DBX2Q6ZNG2 339 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 TMPRSS7Q7RTY8 843 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 ZNF720Q7Z2F6 126 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 ZNF513Q8N8E2 541 aaPredicted RBP11.06□□□□□ -0.64
SF3B3-204ENST00000563739 NAT16Q8N8M0 369 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 C1orf216Q8TAB5 229 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 LRIG1Q96JA1 1093 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
SF3B3-204ENST00000563739 MRPL45Q9BRJ2 306 aaKnown RBP11.06□□□□□ -0.64
SF3B3-204ENST00000563739 CBWD1Q9BRT8 395 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 FAM213AQ9BRX8 229 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 DPEP3Q9H4B8 488 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 PDE11AQ9HCR9 933 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 TRPM5Q9NZQ8 1165 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 BTBD3Q9Y2F9 522 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
SF3B3-204ENST00000563739 STARD13Q9Y3M8 1113 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 RAD54BQ9Y620 910 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 HECTD1Q9ULT8 2610 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 PLXNA2O75051 1894 aa11.06□□□□□ -0.64
SF3B3-204ENST00000563739 A0A087WV48 116 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 MYMKA6NI61 221 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 KCNJ18B7U540 433 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 COCHO43405 550 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 ATXN1LP0C7T5 689 aaKnown RBP11.05□□□□□ -0.64
SF3B3-204ENST00000563739 ZDHHC11BP0C7U3 371 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 WARSP23381 471 aaKnown RBP11.05□□□□□ -0.64
SF3B3-204ENST00000563739 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
SF3B3-204ENST00000563739 HNRNPDQ14103 355 aaKnown RBP11.05□□□□□ -0.64
SF3B3-204ENST00000563739 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
SF3B3-204ENST00000563739 ARL6IP4Q66PJ3 421 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms