RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CTCFP49711 727 aaPredicted RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 HDAC4P56524 1084 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 GJA9P57773 515 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 LILRA4P59901 499 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 MRPS6P82932 125 aaKnown RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 ATP11AP98196 1134 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 CRHR2Q13324 411 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 TFDP2Q14188 446 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 FASTKD3Q14CZ7 662 aaKnown RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 CCDC38Q502W7 563 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 SPATS2Q86XZ4 545 aaKnown RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 PPIL6Q8IXY8 311 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 SPATA18Q8TC71 538 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 CENPIQ92674 756 aaPredicted RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 ZNF317Q96PQ6 595 aaPredicted RBP16.65■□□□□ 0.26
USP8-208ENST00000559329 NCAPGQ9BPX3 1015 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 SNX25Q9H3E2 840 aa16.65■□□□□ 0.26
USP8-208ENST00000559329 A0A087WUV0 522 aaPredicted RBP16.64■□□□□ 0.26
USP8-208ENST00000559329 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.26
USP8-208ENST00000559329 ZNF487B1APH4 448 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 MYO1CO00159 1063 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 MCF2LO15068 1137 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CDH16O75309 829 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 PDGFRBP09619 1106 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 RBP3P10745 1247 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CYBAP13498 195 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 DRD4P21917 467 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CORO7P57737 925 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 ANKRD22Q5VYY1 191 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 VSTM1Q6UX27 236 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 NPNTQ6UXI9 565 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 OSTM1Q86WC4 334 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 ADGRF2Q8IZF7 708 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CYP4X1Q8N118 509 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 PQLC3Q8N755 202 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 RSAD2Q8WXG1 361 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 FAF2Q96CS3 445 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 SNRNP25Q9BV90 132 aaKnown RBP16.64■□□□□ 0.26
USP8-208ENST00000559329 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.26
USP8-208ENST00000559329 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 NGRNQ9NPE2 291 aaKnown RBP16.64■□□□□ 0.26
USP8-208ENST00000559329 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 FAM169AQ9Y6X4 670 aa16.64■□□□□ 0.26
USP8-208ENST00000559329 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 GCAP28676 217 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 ADORA2BP29275 332 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 QPCTQ16769 361 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 SLC9A4Q6AI14 798 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 TWF2Q6IBS0 349 aaKnown RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 CENPUQ71F23 418 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 TDRPQ86YL5 185 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 MAP7D3Q8IWC1 876 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 RIBC1Q8N443 379 aaPredicted RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 SLC2A14Q8TDB8 520 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 HSFY1Q96LI6 401 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 CCDC77Q9BR77 488 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.25
USP8-208ENST00000559329 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
USP8-208ENST00000559329 PCNTO95613 3336 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.63■□□□□ 0.25
USP8-208ENST00000559329 E7ESA3 106 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 SMAPO00193 183 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 CREB1P16220 341 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
USP8-208ENST00000559329 NKX3-2P78367 333 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 ROR1Q01973 937 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 GAD2Q05329 585 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 KRT81Q14533 505 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 CA9Q16790 459 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
USP8-208ENST00000559329 PLD5Q8N7P1 536 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 FAM71DQ8N9W8 422 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 CHMP6Q96FZ7 201 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 FAM107BQ9H098 131 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
USP8-208ENST00000559329 TRPV2Q9Y5S1 764 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 ACTL7BQ9Y614 415 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
USP8-208ENST00000559329 HUS1O60921 280 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 TMEM63AO94886 807 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 TGM2P21980 687 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 STIP1P31948 543 aaKnown RBP16.62■□□□□ 0.25
USP8-208ENST00000559329 ACADSBP45954 432 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 HIF1AQ16665 826 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 ANKRD20A8PQ5CZ79 823 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 C6orf89Q6UWU4 347 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 B3GALNT2Q8NCR0 500 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 GSTCDQ8NEC7 633 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 PCDH19Q8TAB3 1148 aa16.62■□□□□ 0.25
USP8-208ENST00000559329 MAML1Q92585 1016 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms