RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PCDHGB2Q9Y5G2 931 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SPATA31A5Q5VU36 1347 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SPATA31A6Q5VVP1 1343 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SPATA31A7Q8IWB4 1347 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TRGV11A0A075B6L2 103 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A18PA6NE21 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A16PA6NEW6 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A9PA6NNJ1 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A5PA8MXJ8 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 CCNT2O60583 730 aaKnown RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SCAF4O95104 1147 aaKnown RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A15PP0C7V4 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 FAM90A14PP0C7W9 464 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 RBL1P28749 1068 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 MPLP40238 635 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 LILRA4P59901 499 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TMTC4Q5T4D3 741 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 NAA35Q5VZE5 725 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PCSK4Q6UW60 755 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM108Q6UXF1 575 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 USP49Q70CQ1 688 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF551Q7Z340 670 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TRABD2AQ86V40 505 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SFTPA1Q8IWL2 248 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 IZUMO1Q8IYV9 350 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 NME8Q8N427 588 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 MB21D1Q8N884 522 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF398Q8TD17 642 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 THAP4Q8WY91 577 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 C8orf49Q96NF6 230 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 BDH2Q9BUT1 245 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 INO80BQ9C086 356 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SERHL2Q9H4I8 314 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 G6PC2Q9NQR9 355 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PRDM8Q9NQV8 689 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PI4KBQ9UBF8 816 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 STEAP1Q9UHE8 339 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM98Q9Y2Y6 226 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 A0A0U1RQG5 324 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 EFCAB8A8MWE9 144 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 F5H423 210 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 NARSO43776 548 aaKnown RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 COQ9O75208 318 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 PIAS2O75928 621 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 NCR1O76036 304 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 LARGE1O95461 756 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 MYL3P08590 195 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 CYP3A4P08684 503 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 C1SP09871 688 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ARP10275 920 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 PHKA1P46020 1223 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 AVPR1BP47901 424 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TUBA3CQ13748 450 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 BMPR2Q13873 1038 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 USP39Q53GS9 565 aaKnown RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 RBM20Q5T481 1227 aaKnown RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 DENND2CQ68D51 928 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TUBA3EQ6PEY2 450 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 UBE2Q1Q7Z7E8 422 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF280BQ86YH2 543 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SLC44A2Q8IWA5 706 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SYNE4Q8N205 404 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 GLMPQ8WWB7 406 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ATG4AQ8WYN0 398 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 FSD1LQ9BXM9 530 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 UBA5Q9GZZ9 404 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TOR3AQ9H497 397 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 NRDE2Q9H7Z3 1164 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 OBP2BQ9NPH6 170 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TBCCD1Q9NVR7 557 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 LOC105369274A0A096LPK9 316 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 LOC102723532A0A0G2JNH3 316 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 MBD3L5A6NJ08 208 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 F5H0A9 414 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 WDR47O94967 919 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 HKR1P10072 659 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ITPKBP27987 946 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 CRHR2Q13324 411 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TP53BP2Q13625 1128 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TIGD2Q4W5G0 525 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 FTSJ3Q8IY81 847 aaKnown RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SPARTQ8N0X7 666 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 OR4N4Q8N0Y3 316 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TXLNBQ8N3L3 684 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC33Q8N5R6 958 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SSH3Q8TE77 659 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ASB10Q8WXI3 467 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 HERVK_113Q902F9 699 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 RFKQ969G6 155 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ZSWIM1Q9BR11 485 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 TTPALQ9BTX7 342 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF747Q9BV97 191 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 PCDHAC1Q9H158 963 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ABHD16BQ9H3Z7 469 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SLAMF7Q9NQ25 335 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 SLC22A11Q9NSA0 550 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 HPSEQ9Y251 543 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 ARID4BQ4LE39 1312 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-212ENST00000557538 AATKQ6ZMQ8 1374 aa2.01□□□□□ -2.09
HIF1A-212ENST00000557538 CTIFO43310 598 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms