RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SPRY2O43597 315 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 ALPLP05186 524 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 FAM90A13PP0C7W8 464 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 FAM90A24PP0C7X0 464 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 PRR23D2P0DMB1 279 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 CYP19A1P11511 503 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 HTR6P50406 440 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 NEK2P51955 445 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 COPB1P53618 953 aaKnown RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 ID2Q02363 134 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 CTBP1Q13363 440 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 CCNIQ14094 377 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 ZNF267Q14586 743 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 PTCHD3Q3KNS1 767 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 BRDTQ58F21 947 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 TMTC4Q5T4D3 741 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 TMEM65Q6PI78 240 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 ZNF783Q6ZMS7 281 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 MAFAQ8NHW3 353 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 RAPGEF4Q8WZA2 1011 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 PPP2R3CQ969Q6 453 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 MS4A7Q9GZW8 240 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 GAR1Q9NY12 217 aaKnown RBP3.2□□□□□ -1.9
FOXN3-216ENST00000557496 HEY2Q9UBP5 337 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 GABBR1Q9UBS5 961 aa3.2□□□□□ -1.9
FOXN3-216ENST00000557496 TMEM233B4DJY2 109 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 H3BML4 177 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 OFD1O75665 1012 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 PF4V1P10720 104 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 PSG1P11464 419 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 ATF7P17544 494 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-216ENST00000557496 HTR1BP28222 390 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 SLC13A2Q13183 592 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 TMEM63BQ5T3F8 832 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 IFIT1BQ5T764 474 aaKnown RBP3.19□□□□□ -1.9
FOXN3-216ENST00000557496 DENND2CQ68D51 928 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 ANO7Q6IWH7 933 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 RANBP10Q6VN20 620 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 DCDC5Q6ZRR9 648 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 RAB11FIP4Q86YS3 637 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 DENND1CQ8IV53 801 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 SPARTQ8N0X7 666 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 OR6B3Q8NGW1 331 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 WDYHV1Q96HA8 205 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 LYZL4Q96KX0 146 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 NT5C1BQ96P26 610 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 VN1R3Q9BXE9 311 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 TRIM5Q9C035 493 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 SMURF2Q9HAU4 748 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 PCDH12Q9NPG4 1184 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 SNX15Q9NRS6 342 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 HOMER2Q9NSB8 354 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 POT1Q9NUX5 634 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 ZSCAN32Q9NX65 697 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 WWOXQ9NZC7 414 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-216ENST00000557496 IP6K2Q9UHH9 426 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 ANKRD6Q9Y2G4 727 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 COL4A3BPQ9Y5P4 624 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 CDY1Q9Y6F8 540 aa3.19□□□□□ -1.9
FOXN3-216ENST00000557496 A0A1W2PPL8 197 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 H3BNX3 289 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 TMPRSS11DO60235 418 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 SRGAP2O75044 1071 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 UBXN7O94888 489 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 CTSAP10619 480 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 NCLP19338 710 aaKnown RBP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 EPHA3P29320 983 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 RPS13P62277 151 aaKnown RBP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 TIAL1Q01085 375 aaKnown RBP eCLIP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 RAB32Q13637 225 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 ERV3-1Q14264 604 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 KCNB1Q14721 858 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 DCAF12L1Q5VU92 463 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 DAAM2Q86T65 1068 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 ANKRD13BQ86YJ7 626 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 MPP5Q8N3R9 675 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 ARFGAP1Q8N6T3 406 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 SMRP1Q8NCR6 262 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 ZNF548Q8NEK5 533 aaPredicted RBP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 DNAJB14Q8TBM8 379 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 MAML1Q92585 1016 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 ZMAT3Q9HA38 289 aaKnown RBP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 TRIM36Q9NQ86 728 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 XPNPEP3Q9NQH7 507 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 DNMT3BQ9UBC3 853 aaKnown RBP3.18□□□□□ -1.9
FOXN3-216ENST00000557496 USP22Q9UPT9 525 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 SQORQ9Y6N5 450 aa3.18□□□□□ -1.9
FOXN3-216ENST00000557496 FER1L4A9Z1Z3 1794 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 CADPSQ9ULU8 1353 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 B4DGG1 531 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 SMAD6O43541 496 aaKnown RBP3.17□□□□□ -1.9
FOXN3-216ENST00000557496 AP1G1O43747 822 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 CRYABP02511 175 aaKnown RBP3.17□□□□□ -1.9
FOXN3-216ENST00000557496 KITP10721 976 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 CREB1P16220 341 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 EN2P19622 333 aaPredicted RBP3.17□□□□□ -1.9
FOXN3-216ENST00000557496 PRKAR1BP31321 381 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 UQCRC1P31930 480 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 ME1P48163 572 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms