RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 NOTUMQ6P988 496 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 RSPO2Q6UXX9 243 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 BHLHA9Q7RTU4 235 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ANKRD33Q7Z3H0 272 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SLFN11Q7Z7L1 901 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SYT9Q86SS6 491 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ECHDC2Q86YB7 292 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 PASD1Q8IV76 773 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SLITRK4Q8IW52 837 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 FAM169BQ8N8A8 192 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 C12orf29Q8N999 325 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ZMIZ2Q8NF64 920 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DBF4BQ8NFT6 615 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF417Q8TAU3 575 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ALG3Q92685 438 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 JAKMIP2Q96AA8 810 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 SUSD3Q96L08 255 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 NT5C1BQ96P26 610 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF587Q96SQ5 575 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 ADAM2Q99965 735 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 RHOBTB2Q9BYZ6 727 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 MAGEB5Q9BZ81 275 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 THAP2Q9H0W7 228 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 RNF208Q9H0X6 261 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 KIAA1586Q9HCI6 787 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 CRTAC1Q9NQ79 661 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 CISHQ9NSE2 258 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 MARCH5Q9NX47 278 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DPP3Q9NY33 737 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 MARK1Q9P0L2 795 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 CALCOCO1Q9P1Z2 691 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DNAJB4Q9UDY4 337 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 AGAP1Q9UPQ3 857 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 GPC6Q9Y625 555 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-230ENST00000554673 MYLKQ15746 1914 aa6.23□□□□□ -1.41
ATXN3-230ENST00000554673 DOCK4Q8N1I0 1966 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 MYO7AQ13402 2215 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 NYNRINQ9P2P1 1898 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 A0A0U1RQG5 324 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 MACROD2A1Z1Q3 448 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ARL5CA6NH57 179 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 GOLGA6L6A8MZA4 724 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 I6L893 689 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ENC1O14682 589 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 BUB1BO60566 1050 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 N4BP1O75113 896 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ZC3H11AO75152 810 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PEX14O75381 377 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 RPS6KA5O75582 802 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 IL18RAPO95256 599 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CXCL10P02778 98 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 FERP16591 822 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ZSCAN20P17040 1043 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CD58P19256 250 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TFE3P19532 575 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 EN2P19622 333 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TMOD1P28289 359 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 GRNP28799 593 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CDH5P33151 784 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PBX3P40426 434 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 STAT1P42224 750 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PITX1P78337 314 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 DEFB103AP81534 67 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CDR2Q01850 454 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 LRP8Q14114 963 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TMEM132DQ14C87 1099 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 DDR2Q16832 855 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 DCAF4L1Q3SXM0 396 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TIGD5Q53EQ6 642 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ALKBH5Q6P6C2 394 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TMEM270Q6UE05 265 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 C8orf86Q6ZUL3 223 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 LRRTM3Q86VH5 581 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CCDC170Q8IYT3 715 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 NME8Q8N427 588 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PCSK9Q8NBP7 692 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ANKRD20A12PQ8NF67 263 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 JOSD2Q8TAC2 188 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF606Q8WXB4 792 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 NDRG1Q92597 394 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 KRT35Q92764 455 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CD101Q93033 1021 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TRIM44Q96DX7 344 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PAWRQ96IZ0 340 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CASD1Q96PB1 797 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 TCHPQ9BT92 498 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ASB7Q9H672 318 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 STARD7Q9NQZ5 370 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 UBP1Q9NZI7 540 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 DNAI1Q9UI46 699 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 GUCA1BQ9UMX6 200 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 PCDHGC5Q9Y5F6 944 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms