RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 RPL7AP62424 266 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 BST2Q10589 180 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 POU4F2Q12837 409 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 PTK6Q13882 451 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 PPP1R7Q15435 360 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 SOWAHAQ2M3V2 549 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 DEFB115Q30KQ5 88 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 BOLA3Q53S33 107 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 EMC10Q5UCC4 262 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 GDF6Q6KF10 455 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 CXCL17Q6UXB2 119 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 SPOCD1Q6ZMY3 1216 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF365Q70YC5 407 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 TRMT10CQ7L0Y3 403 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 MAP7D3Q8IWC1 876 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 TEKT4Q8WW24 435 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ART4Q93070 314 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 NKD2Q969F2 451 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 LENG1Q96BZ8 264 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 SNF8Q96H20 258 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 SLITRK1Q96PX8 696 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 PPP1R10Q96QC0 940 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 TWNKQ96RR1 684 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 CPXM1Q96SM3 734 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 DCLK3Q9C098 648 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 PHACTR1Q9C0D0 580 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 RSAD1Q9HA92 442 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ERVK-5Q9HDB9 667 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ZDHHC18Q9NUE0 388 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 TUBGCP4Q9UGJ1 667 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 DDX20Q9UHI6 824 aaKnown RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ST3GAL5Q9UNP4 418 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 NR2E1Q9Y466 385 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 hCG_1818297A0A087WSY0 165 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 A0A0U1RQF3 1178 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 MYADML2A6NDP7 307 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ZSCAN5CA6NGD5 496 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 C2CD4BA6NLJ0 364 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 F8VP50 259 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 H3BQF6 201 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 AGPSO00116 658 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 GABRDO14764 452 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 INPPL1O15357 1258 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 LRCH4O75427 683 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SYF2O95926 243 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PGK1P00558 417 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ITGAVP06756 1048 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 THP07101 528 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 NUDT17P0C025 328 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 MYZAPP0CAP1 466 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 RALAP11233 206 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 COL6A1P12109 1028 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 RARGP13631 454 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 AKAP5P24588 427 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 CDKN2BP42772 138 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SSR1P43307 286 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PTPN9P43378 593 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 LILRA4P59901 499 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF200P98182 395 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SLC6A3Q01959 620 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SLC25A11Q02978 314 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF252P-AS1Q0IIN9 211 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TFDP2Q14188 446 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PDK2Q15119 407 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 KCNA10Q16322 511 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PTGISQ16647 500 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 GOLGA7BQ2TAP0 167 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 FAM47CQ5HY64 1035 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 EFHC1Q5JVL4 640 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 FAM102AQ5T9C2 384 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SCARA3Q6AZY7 606 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TTC27Q6P3X3 843 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 SLC26A9Q7LBE3 791 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TMC3Q7Z5M5 1100 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PCGF5Q86SE9 256 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 RELL1Q8IUW5 271 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PSTKQ8IV42 348 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 GSPT2Q8IYD1 628 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ADGRF2Q8IZF7 708 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 ARFGAP2Q8N6H7 521 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 CMASQ8NFW8 434 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 OR6B3Q8NGW1 331 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 FAM76AQ8TAV0 307 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 KCTD13Q8WZ19 329 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 C18orf25Q96B23 403 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 CAPNS2Q96L46 248 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 HNRNPABQ99729 332 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 MRPL45Q9BRJ2 306 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM109Q9BVC6 243 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TXLNGYQ9BZA5 131 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 TRIM7Q9C029 511 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 STMN4Q9H169 189 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 PABPC3Q9H361 631 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 METTL5Q9NRN9 209 aaKnown RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-221ENST00000553498 HMGXB4Q9UGU5 601 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 DSEQ9UL01 958 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 GABRQQ9UN88 632 aa7.66□□□□□ -1.18
ATXN3-221ENST00000553498 USTQ9Y2C2 406 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms