RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 FRMD4BQ9Y2L6 1034 aa5.8□□□□□ -1.48
ATXN3-217ENST00000553287 CASKIN1Q8WXD9 1431 aa5.8□□□□□ -1.48
ATXN3-217ENST00000553287 CCNB3Q8WWL7 1395 aa5.8□□□□□ -1.48
ATXN3-217ENST00000553287 MAP3K1Q13233 1512 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 NCOA2Q15596 1464 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 CCDC18Q5T9S5 1454 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 NLRP1Q9C000 1473 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 MANSC4A6NHS7 340 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-217ENST00000553287 TARM1B6A8C7 271 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 FAM227AF5H4B4 570 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 H0YIZ8 118 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 CSF1RP07333 972 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 ENGP17813 658 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 KCNA3P22001 575 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 ATXN1P54253 815 aaKnown RBP5.79□□□□□ -1.48
ATXN3-217ENST00000553287 SRSF4Q08170 494 aaKnown RBP5.79□□□□□ -1.48
ATXN3-217ENST00000553287 AARS2Q5JTZ9 985 aaKnown RBP5.79□□□□□ -1.48
ATXN3-217ENST00000553287 DEPDC1Q5TB30 811 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 PTF1AQ7RTS3 328 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 MYO1HQ8N1T3 1032 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 HASPINQ8TF76 798 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 XAGE5Q8WWM1 108 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 R3HDM4Q96D70 268 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 C22orf23Q9BZE7 217 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 ZNF518BQ9C0D4 1074 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 SACM1LQ9NTJ5 587 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 CPNE7Q9UBL6 633 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 EEA1Q15075 1411 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 FAM135BQ49AJ0 1406 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 TIAM1Q13009 1591 aa5.79□□□□□ -1.48
ATXN3-217ENST00000553287 SCAF11Q99590 1463 aaKnown RBP5.78□□□□□ -1.48
ATXN3-217ENST00000553287 MYO1FO00160 1098 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 TBX3O15119 743 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 JTBO76095 146 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 ADORA2AP29274 412 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 PDE6CP51160 858 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 PRKAG1P54619 331 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 SLC44A4Q53GD3 710 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 APOA5Q6Q788 366 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 SLC29A4Q7RTT9 530 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 ABRAQ8N0Z2 381 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 BPIFB1Q8TDL5 484 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 OSCP1Q8WVF1 389 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 TBC1D5Q92609 795 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 DPF1Q92782 380 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 A1CFQ9NQ94 594 aaKnown RBP5.78□□□□□ -1.48
ATXN3-217ENST00000553287 DUSP22Q9NRW4 184 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 SH3BP4Q9P0V3 963 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 DDX20Q9UHI6 824 aaKnown RBP5.78□□□□□ -1.48
ATXN3-217ENST00000553287 KIAA1107Q9UPP5 1409 aa5.78□□□□□ -1.48
ATXN3-217ENST00000553287 ERVK-7P63135 1459 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 SETBP1Q9Y6X0 1596 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 GOLGA6CA6NDK9 693 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 GOLGA6BA6NDN3 693 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 A6NNZ2 444 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 PRKCGP05129 697 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 GOLGA6DP0CG33 693 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 ZKSCAN1P17029 563 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TFF2Q03403 129 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 LY6KQ17RY6 165 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TBC1D25Q3MII6 688 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TMEM119Q4V9L6 283 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 RNF220Q5VTB9 566 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 DCAF12L1Q5VU92 463 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 ZKSCAN2Q63HK3 967 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 SRRM1Q8IYB3 904 aaKnown RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 SEMA6DQ8NFY4 1073 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 GBA2Q9HCG7 927 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TRMT13Q9NUP7 481 aaKnown RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 STK32BQ9NY57 414 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 GOLGA6AQ9NYA3 693 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 SERGEFQ9UGK8 458 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 TBC1D30Q9Y2I9 924 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 ABCC3O15438 1527 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 PIK3C2BO00750 1634 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 COL16A1Q07092 1604 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-217ENST00000553287 PLEKHH2Q8IVE3 1493 aa5.77□□□□□ -1.49
ATXN3-217ENST00000553287 VSTM5A8MXK1 200 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 ISM1B1AKI9 464 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 ZNF213O14771 459 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 BRAFP15056 766 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 CACNB3P54284 484 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 FOXF2Q12947 444 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 GRM1Q13255 1194 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 CNGA2Q16280 664 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 PTCHD3Q3KNS1 767 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 ZDHHC24Q6UX98 284 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 NAPRTQ6XQN6 538 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 CCDC149Q6ZUS6 474 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 C14orf80Q86SX3 495 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 IZUMO1Q8IYV9 350 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 OR56A3Q8NH54 315 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 RP9Q8TA86 221 aaKnown RBP5.76□□□□□ -1.49
ATXN3-217ENST00000553287 TMEM171Q8WVE6 324 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 DDB2Q92466 427 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 MAML1Q92585 1016 aa5.76□□□□□ -1.49
ATXN3-217ENST00000553287 DPCDQ9BVM2 203 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-217ENST00000553287 XPNPEP3Q9NQH7 507 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms