RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SMARCB1Q12824 385 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 EIF4EBP2Q13542 120 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 PDK2Q15119 407 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 CCDC14Q49A88 953 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 NOMO2Q5JPE7 1267 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 ZNF787Q6DD87 383 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TRNP1Q6NT89 227 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 GLB1LQ6UWU2 654 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 FAM183BPQ6ZVS7 135 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 DNAJC5GQ8N7S2 189 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 IRGQQ8WZA9 623 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 LPPQ93052 612 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 NKD2Q969F2 451 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 FAF2Q96CS3 445 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 CEP295NLQ96MC4 621 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 AP1M1Q9BXS5 423 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TXLNGYQ9BZA5 131 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 DDX47Q9H0S4 455 aaKnown RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 DPEP3Q9H4B8 488 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 EPB41L5Q9HCM4 733 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 CRTAC1Q9NQ79 661 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 CNGB3Q9NQW8 809 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 RRN3Q9NYV6 651 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 IL37Q9NZH6 218 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 AMACRQ9UHK6 382 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TSC2P49815 1807 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 DNAH12Q6ZR08 3092 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 hCG_1818297A0A087WSY0 165 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CARNS1A5YM72 827 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 NRG2O14511 850 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 MYBL2P10244 700 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 KDELR1P24390 212 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 PSMA2P25787 234 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 IL1R2P27930 398 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CARSP49589 748 aaKnown RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 AIF1P55008 147 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 SLC8A3P57103 927 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 FAM193AP78312 1265 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 FAAP100Q0VG06 881 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CASP8Q14790 479 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CLLU1OSQ5K130 101 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 ALS2CLQ60I27 953 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CCDC137Q6PK04 289 aaKnown RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CLEC20AQ6ZU45 233 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 BBS12Q6ZW61 710 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 PIGZQ86VD9 579 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 SLC2A14Q8TDB8 520 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 GRK7Q8WTQ7 553 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 RXFP2Q8WXD0 754 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CASKIN2Q8WXE0 1202 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 SEPT8Q92599 483 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 MAGOHBQ96A72 148 aaKnown RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 ZNF333Q96JL9 665 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 SLC2A13Q96QE2 648 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 TMEM175Q9BSA9 504 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 B3GNT5Q9BYG0 378 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 DCLK3Q9C098 648 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 ZDHHC18Q9NUE0 388 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 DDX43Q9NXZ2 648 aaKnown RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 WHRNQ9P202 907 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 RCOR3Q9P2K3 495 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 USP18Q9UMW8 372 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
TMEM116-216ENST00000552800 CENPFP49454 3210 aa10.29□□□□□ -0.76
TMEM116-216ENST00000552800 TET1Q8NFU7 2136 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TCRBV7S2A1N4TA0A589 114 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TMEM110-MUSTN1A8MSY1 372 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TULP2O00295 520 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TP73O15350 636 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 HSF2BPO75031 334 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 B3GAT3O94766 335 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 DDHD2O94830 711 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 ITGAVP06756 1048 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 PDGFRBP09619 1106 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 ITIH2P19823 946 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 IL4RP24394 825 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 IGFBP6P24592 240 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-216ENST00000552800 TKTP29401 623 aaKnown RBP10.28□□□□□ -0.76
TMEM116-216ENST00000552800 MIPP30301 263 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 NOS2P35228 1153 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 FLT3P36888 993 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 HSPA9P38646 679 aaKnown RBP10.28□□□□□ -0.76
TMEM116-216ENST00000552800 MATKP42679 507 aa10.28□□□□□ -0.76
TMEM116-216ENST00000552800 ZNF135P52742 658 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-216ENST00000552800 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
TMEM116-216ENST00000552800 MRPS5P82675 430 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms