RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 OPRD1P41143 372 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 PIK3CAP42336 1068 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 NDST1P52848 882 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 SLC5A3P53794 718 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 FAM160A2Q8N612 972 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 SCAMP5Q8TAC9 235 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 SEMA4GQ9NTN9 838 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 SMPD4Q9NXE4 827 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 CHORDC1Q9UHD1 332 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 FOXD2O60548 495 aaPredicted RBP15.24■□□□□ 0.03
COL2A1-209ENST00000546974 RPP40O75818 363 aaKnown RBP15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CYP17A1P05093 508 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 ZDHHC11BP0C7U3 371 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 KRT13P13646 458 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 TRIM21P19474 475 aaKnown RBP15.24■□□□□ 0.03
COL2A1-209ENST00000546974 RPL13P26373 211 aaKnown RBP15.24■□□□□ 0.03
COL2A1-209ENST00000546974 ASPAP45381 313 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 TUBP50607 506 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 DHCR24Q15392 516 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CSRP2Q16527 193 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 GAB4Q2WGN9 574 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 SPOPLQ6IQ16 392 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CACNA2D4Q7Z3S7 1137 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 ZMIZ2Q8NF64 920 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CCDC34Q96HJ3 373 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 LOXL4Q96JB6 756 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 SMOQ99835 787 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 RTKNQ9BST9 563 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 IMPG2Q9BZV3 1241 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 GOLPH3LQ9H4A5 285 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CFAP97Q9P2B7 532 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 TBC1D14Q9P2M4 693 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 CDV3Q9UKY7 258 aaKnown RBP15.24■□□□□ 0.03
COL2A1-209ENST00000546974 MAPK8IP1Q9UQF2 711 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
COL2A1-209ENST00000546974 SPTBN2O15020 2390 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 E2F8A0AVK6 867 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 K7EQS6 105 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 AXIN1O15169 862 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 COCHO43405 550 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 CCDC192P0DO97 292 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 CCDC130P13994 396 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 EIF2DP41214 584 aaKnown RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 MCCD1P59942 119 aaPredicted RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 INCA1Q0VD86 236 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 ADAM9Q13443 819 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 DMC1Q14565 340 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 PRR23CQ6ZRP0 262 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 SLC2A14Q8TDB8 520 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 ZFRQ96KR1 1074 aaKnown RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 HHIPQ96QV1 700 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 DUSP9Q99956 384 aaKnown RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 FBXO44Q9H4M3 255 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 CYP3A43Q9HB55 503 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 POLR3BQ9NW08 1133 aaPredicted RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 HMGXB4Q9UGU5 601 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 EBF1Q9UH73 591 aa15.23■□□□□ 0.03
COL2A1-209ENST00000546974 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.23■□□□□ 0.03
COL2A1-209ENST00000546974 MED19A0JLT2 244 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-209ENST00000546974 BEST1O76090 585 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 APBB3O95704 486 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 GCLMP48507 274 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 ORC1Q13415 861 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 EDRF1Q3B7T1 1238 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 ZCWPW2Q504Y3 356 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 KBTBD6Q86V97 674 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 C12orf29Q8N999 325 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 NETO1Q8TDF5 533 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 USP33Q8TEY7 942 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 ZC3H10Q96K80 434 aaKnown RBP15.22■□□□□ 0.03
COL2A1-209ENST00000546974 HNRNPABQ99729 332 aaKnown RBP15.22■□□□□ 0.03
COL2A1-209ENST00000546974 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 GMIPQ9P107 970 aa15.22■□□□□ 0.03
COL2A1-209ENST00000546974 A0A0A0MRY4 1105 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 EPN2O95208 641 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 ADH1CP00326 375 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 FAM200BP0CF97 657 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 GTF2H1P32780 548 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 MRPS21P82921 87 aaKnown RBP15.21■□□□□ 0.03
COL2A1-209ENST00000546974 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 FAXDC2Q96IV6 333 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 TWNKQ96RR1 684 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 PNKPQ96T60 521 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms