RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PRPF38AQ8NAV1 312 aaKnown RBP7.8□□□□□ -1.16
CHPT1-203ENST00000546873 SHCBP1Q8NEM2 672 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 DEFB118Q96PH6 123 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PPP1R9BQ96SB3 815 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 LRRC27Q9C0I9 530 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 CCPG1Q9ULG6 757 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 GABRQQ9UN88 632 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 OTOFQ9HC10 1997 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 UBA6A0AVT1 1052 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 PMS2P1A4D2B8 440 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 C19orf81C9J6K1 198 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 MAFGO15525 162 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 ZBED4O75132 1171 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 FLOT1O75955 427 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 TDP2O95551 362 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 ICAM1P05362 532 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 TPM3P06753 285 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 VCAM1P19320 739 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 MSX2P35548 267 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SREBF1P36956 1147 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 MECP2P51608 486 aaKnown RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SETQ01105 290 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 AMPD3Q01432 767 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 MYL5Q02045 173 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 FOXE3Q13461 319 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 STIM1Q13586 685 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 GRM7Q14831 915 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 LONRF3Q496Y0 759 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 USP39Q53GS9 565 aaKnown RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 KRT79Q5XKE5 535 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 FAM109BQ6ICB4 259 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SLFN12LQ6IEE8 588 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 C17orf99Q6UX52 265 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 C11orf57Q6ZUT1 292 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 ADGRE4PQ86SQ3 457 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 LUZP1Q86V48 1076 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SAMD3Q8N6K7 520 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 AOPEPQ8N6M6 819 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 MLKLQ8NB16 471 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 ERMNQ8TAM6 284 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 CFHR4Q92496 578 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 GCDHQ92947 438 aaPredicted RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 EPSTI1Q96J88 318 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 CLUHP3Q96NS8 147 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 CCSER1Q9C0I3 900 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 PLA2G3Q9NZ20 509 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 ZNF112Q9UJU3 913 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 TNPO3Q9Y5L0 923 aaKnown RBP7.79□□□□□ -1.16
CHPT1-203ENST00000546873 TTC28Q96AY4 2481 aa7.79□□□□□ -1.16
CHPT1-203ENST00000546873 SYNRGQ9UMZ2 1314 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 IKBKBO14920 756 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 TBX3O15119 743 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 ADCY5O95622 1261 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 CFBP00751 764 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 MSNP26038 577 aaKnown RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 HOXA7P31268 230 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 BACE1P56817 501 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 VGLL4Q14135 290 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 DHX8Q14562 1220 aaKnown RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 DGKDQ16760 1214 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 DPCR1Q3MIW9 517 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 PIK3R6Q5UE93 754 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 USP17L6PQ6QN14 398 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 NECAB2Q7Z6G3 386 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 D2HGDHQ8N465 521 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 C4orf32Q8N8J7 132 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 FOXRED1Q96CU9 486 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 MAML3Q96JK9 1138 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 PDLIM2Q96JY6 352 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 C12orf42Q96LP6 360 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 GSDMAQ96QA5 445 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 NT5C3AQ9H0P0 336 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 TMEM60Q9H2L4 133 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 RPAP3Q9H6T3 665 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-203ENST00000546873 LRWD1Q9UFC0 647 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 TCEAL9Q9UHQ7 104 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 MYH7BA7E2Y1 1941 aa7.78□□□□□ -1.16
CHPT1-203ENST00000546873 LOC285556D6RIA3 1793 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 MEIS2O14770 477 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 SLC37A4O43826 429 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 PPP1R2P41236 205 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 TECP42680 631 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 HMGA2P52926 109 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 OAZ1P54368 228 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 SNAP25P60880 206 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 HGFACQ04756 655 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 SPP2Q13103 211 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 DUSP8Q13202 625 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 SQSTM1Q13501 440 aa7.77□□□□□ -1.17
CHPT1-203ENST00000546873 KARSQ15046 597 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms