RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CBWD6Q4V339 395 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CBWD3Q5JTY5 395 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CBWD5Q5RIA9 395 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CLEC20AQ6ZU45 233 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 GPRIN1Q7Z2K8 1008 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FBXL13Q8NEE6 735 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ATRIPQ8WXE1 791 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TATDN2Q93075 761 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FBXO32Q969P5 355 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FAXDC2Q96IV6 333 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NT5C1AQ9BXI3 368 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 EPC1Q9H2F5 836 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MMRN2Q9H8L6 949 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FAM49BQ9NUQ9 324 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 RAB20Q9NX57 234 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CPQQ9Y646 472 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 COCHO43405 550 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 EGFP01133 1207 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 HOXA6P31267 233 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 IFNAR2P48551 515 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MXI1P50539 228 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 LRRC63Q05C16 580 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CPA6Q8N4T0 437 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ATP2A3Q93084 1043 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SLC35C1Q96A29 364 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CYFIP2Q96F07 1278 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 P2RY13Q9BPV8 354 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 GTPBP4Q9BZE4 634 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SMPD4Q9NXE4 827 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 GMIPQ9P107 970 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MYO16Q9Y6X6 1858 aa13.88□□□□□ -0.19
TNFRSF1A-215ENST00000543359 GREM1O60565 184 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CLSTN1O94985 981 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ABL1P00519 1130 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FAM200BP0CF97 657 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CD58P19256 250 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DRD1P21728 446 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ADORA2BP29275 332 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 OPRD1P41143 372 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TUBP50607 506 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NRLP54845 237 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 AMPD2Q01433 879 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MORC3Q14149 939 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 HECTD3Q5T447 861 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FILIP1Q7Z7B0 1213 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DCLK2Q8N568 766 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 WBP2Q969T9 261 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TSG101Q99816 390 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ARID3AQ99856 593 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 OSER1Q9NX31 292 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SDK1Q7Z5N4 2213 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 KIAA1549LQ6ZVL6 1849 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CHURC1-FNTBB4DL54 471 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 HRO43593 1189 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 STX10O60499 249 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CYP17A1P05093 508 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CHRM1P11229 460 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TGM1P22735 817 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FNTBP49356 437 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 RAD23BP54727 409 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PPP1R26Q5T8A7 1209 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 RHBDF2Q6PJF5 856 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FOXR2Q6PJQ5 311 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 UBR7Q8N806 425 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TTC16Q8NEE8 873 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 RUBCNQ92622 972 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CD101Q93033 1021 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FBXO44Q9H4M3 255 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FAM124BQ9H5Z6 455 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PNPLA8Q9NP80 782 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 POLR3BQ9NW08 1133 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 HOOK1Q9UJC3 728 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ANTXRLA6NF34 631 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SCAMP3O14828 347 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PMM2O15305 246 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 RNF40O75150 1001 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NFATC1O95644 943 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TBX18O95935 607 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MBL2P11226 248 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 KIF11P52732 1056 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 MESP2Q0VG99 397 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms