RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZDHHC18Q9NUE0 388 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 MKI67P46013 3256 aaKnown RBP17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 F8W810 466 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 GRAP2O75791 330 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 EOMESO95936 686 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 PTPN1P18031 435 aaKnown RBP17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 BRCC3P46736 316 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 FAM189BP81408 668 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 TUSC3Q13454 348 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 TAF5Q15542 800 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 CLLU1OSQ5K130 101 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 ERMARDQ5T6L9 678 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 ARFGAP1Q8N6T3 406 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 CENPTQ96BT3 561 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 CHMP6Q96FZ7 201 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 XPO6Q96QU8 1125 aaKnown RBP17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 HERPUD2Q9BSE4 406 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 B3GNT5Q9BYG0 378 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 EPB41L4BQ9H329 900 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 KLHL11Q9NVR0 708 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 CLDN5O00501 218 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 B4GALT3O60512 393 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 ITGB1P05556 798 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 SCTRP47872 440 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 CYB5D1Q6P9G0 228 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 TMEM110Q86TL2 294 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 FUKQ8N0W3 1084 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 NIPA2Q8N8Q9 360 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 PRELID2Q8N945 189 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 P3H4Q92791 437 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 HAUS2Q9NVX0 235 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 SHBGP04278 402 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 NUDT17P0C025 328 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 FAM163BP0C2L3 166 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 SETSIPP0DME0 302 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 BCAT1P54687 386 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 BST2Q10589 180 aaKnown RBP17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 CLUL1Q15846 466 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 ANKS1BQ7Z6G8 1248 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZNF280BQ86YH2 543 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 FAM129AQ9BZQ8 928 aa17.88■□□□□ 0.45
PCDHB17P-201ENST00000539533 FAM187AA6NFU0 413 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PAPSS1O43252 624 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 RARAP10276 462 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 MNX1P50219 401 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 SIX1Q15475 284 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 MDH1BQ5I0G3 518 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 WLSQ5T9L3 541 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 TRNP1Q6NT89 227 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 GLB1LQ6UWU2 654 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PAQR9Q6ZVX9 377 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 CCDC50Q8IVM0 306 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PARP9Q8IXQ6 854 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 KATNAL2Q8IYT4 538 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 FNIP1Q8TF40 1166 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 CCT6BQ92526 530 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 ACSF2Q96CM8 615 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 HNRNPABQ99729 332 aaKnown RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PLVAPQ9BX97 442 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 MIS12Q9H081 205 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PABPC3Q9H361 631 aaKnown RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 CRTAC1Q9NQ79 661 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PI4K2BG5E9Z4 385 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 INPPL1O15357 1258 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 LRCH4O75427 683 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 DDHD2O94830 711 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 LHX1P48742 406 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PMS2P54278 862 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 DHX34Q14147 1143 aaKnown RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 SNCBQ16143 134 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 PLEKHG4Q58EX7 1191 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 OLFML1Q6UWY5 402 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 TMEM86AQ8N2M4 240 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 STK32AQ8WU08 396 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 RNF25Q96BH1 459 aaPredicted RBP17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 MIEF2Q96C03 454 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 SGSM3Q96HU1 749 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 HEMGNQ9BXL5 484 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 FTHL17Q9BXU8 183 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 DNAI2Q9GZS0 605 aa17.87■□□□□ 0.45
PCDHB17P-201ENST00000539533 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 FSCN2O14926 492 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 BEST1O76090 585 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 TCTN1Q2MV58 587 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZFYVE27Q5T4F4 411 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 SH3PXD2AQ5TCZ1 1133 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 CEP57Q86XR8 500 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 JAMLQ86YT9 394 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 CLEC4CQ8WTT0 213 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 KHSRPQ92945 711 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 PGM2Q96G03 612 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 SCLYQ96I15 445 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 KDM4CQ9H3R0 1056 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 MYBPHLA2RUH7 354 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 ENPP3O14638 875 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 RALAP11233 206 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms