RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 KRT12Q99456 494 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRIM9Q9C026 710 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MARCH7Q9H992 704 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 IP6K2Q9UHH9 426 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRAF3IP3Q9Y228 551 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CLEC11AQ9Y240 323 aa6□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ATP8B3O60423 1300 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C15orf38-AP3S2A0A0A6YYH1 394 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LGALS16A8MUM7 142 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 XPO1O14980 1071 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 XPOTO43592 962 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DNAJC6O75061 913 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RAD17O75943 681 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GH2P01242 217 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PRKACAP17612 351 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MUTP22033 750 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TARSP26639 723 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PSMC2P35998 433 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GPD2P43304 727 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SLC18A1P54219 525 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 S100A12P80511 92 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LRRC63Q05C16 580 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 STK4Q13043 487 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SQLEQ14534 574 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MEI1Q5TIA1 1274 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 VSTM1Q6UX27 236 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PRR23CQ6ZRP0 262 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ARPINQ7Z6K5 226 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RTKN2Q8IZC4 609 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MB21D1Q8N884 522 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GIMAP8Q8ND71 665 aaPredicted RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 APPL2Q8NEU8 664 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 STMN2Q93045 179 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TTC17Q96AE7 1141 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GMCL1Q96IK5 515 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SECISBP2Q96T21 854 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SELENOSQ9BQE4 189 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZNF341Q9BYN7 854 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KCNN2Q9H2S1 579 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SYTL2Q9HCH5 934 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C8orf4Q9NR00 106 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LRWD1Q9UFC0 647 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MOSPD1Q9UJG1 213 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ATF5Q9Y2D1 282 aaPredicted RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PCDHGA3Q9Y5H0 932 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PCDHA1Q9Y5I3 950 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 MAD1L1Q9Y6D9 718 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DUSP10Q9Y6W6 482 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KRBA1A5PL33 1030 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRIM49BA6NDI0 452 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 POTEMA6NI47 508 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZSCAN5BA6NJL1 495 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 BTNL10A8MVZ5 291 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RNF103O00237 685 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SLC9A3R1O14745 358 aaPredicted RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NDUFB10O96000 172 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZNF23P17027 643 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PON1P27169 355 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GNL1P36915 607 aaPredicted RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 CLK3P49761 638 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 UBXN2AP68543 259 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 AMPD3Q01432 767 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GRB10Q13322 594 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 SNAPC2Q13487 334 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TRMT5Q32P41 509 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 KCTD21Q4G0X4 260 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 TCP11X2Q5H9J9 407 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 IQSEC1Q6DN90 963 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 USP17L6PQ6QN14 398 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GPR141Q7Z602 305 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DEFB132Q7Z7B7 95 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RELL1Q8IUW5 271 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LARGE2Q8N3Y3 721 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RNF169Q8NCN4 708 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 EPS8L3Q8TE67 593 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 FAM172AQ8WUF8 416 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 C10orf82Q8WW14 230 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ARHGEF2Q92974 986 aaKnown RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 GMLQ99445 158 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 DOK1Q99704 481 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 LIN7BQ9HAP6 207 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NEK6Q9HC98 313 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZNF277Q9NRM2 450 aaPredicted RBP5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ZDHHC18Q9NUE0 388 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 NDE1Q9NXR1 346 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 RABGAP1Q9Y3P9 1069 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 PCDHA13Q9Y5I0 950 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 ACTL7BQ9Y614 415 aa5.99□□□□□ -1.45
RAB3GAP1-207ENST00000539493 WASF2Q9Y6W5 498 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms