RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 C2orf27AQ580R0 203 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 HERC4Q5GLZ8 1057 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 FBXO47Q5MNV8 452 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 MFSD5Q6N075 450 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PSRC1Q6PGN9 363 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PAQR3Q6TCH7 311 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 RSPO2Q6UXX9 243 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 TSHZ1Q6ZSZ6 1077 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 CATSPER4Q7RTX7 472 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 APBB1IPQ7Z5R6 666 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SRGAP1Q7Z6B7 1085 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 DEFB128Q7Z7B8 93 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SFR1Q86XK3 245 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 RPUSD2Q8IZ73 545 aaKnown RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 LINC01465Q8N7H1 131 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PLEKHO2Q8TD55 490 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 LRRC15Q8TF66 581 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SEPT8Q92599 483 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 STAMQ92783 540 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 APBB2Q92870 758 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PTPRN2Q92932 1015 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 BADQ92934 168 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 KCNN1Q92952 543 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 KISS1RQ969F8 398 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SMARCE1Q969G3 411 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 TRIM43Q96BQ3 446 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 BICD1Q96G01 975 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PAGE5Q96GU1 130 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 TMEM169Q96HH4 297 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SCLYQ96I15 445 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF668Q96K58 619 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 TIGD1Q96MW7 591 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 CEP89Q96ST8 783 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 C7orf25Q9BPX7 421 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 FDXACB1Q9BRP7 624 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 NFKBIZQ9BYH8 718 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 WNT8AQ9H1J5 351 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 NUP62CLQ9H1M0 184 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 C2orf40Q9H1Z8 148 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 BLZF1Q9H2G9 400 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 MTIF3Q9H2K0 278 aaKnown RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 MRPL44Q9H9J2 332 aaKnown RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 PANK4Q9NVE7 773 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 RMND1Q9NWS8 449 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 MRPS23Q9Y3D9 190 aaKnown RBP4.7□□□□□ -1.66
SNHG1-208ENST00000538266 SQORQ9Y6N5 450 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 MYH11P35749 1972 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 UMODL1Q5DID0 1318 aa4.7□□□□□ -1.66
SNHG1-208ENST00000538266 LTBP2Q14767 1821 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ABHD14A-ACY1A0A1B0GW23 586 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PVALEFA0A1B0GWK0 134 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ZC3H12DA2A288 527 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 H0YGN5 161 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 K7ERI5 159 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ABLIM1O14639 778 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 HNRNPDLO14979 420 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 SLC16A4O15374 487 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 EFCAB14O75071 495 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CSDE1O75534 798 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 GCNT3O95395 438 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CYBBP04839 570 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 RPN1P04843 607 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ZSCAN20P17040 1043 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ITGB8P26012 769 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CD52P31358 61 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 MAGEA10P43363 369 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF131P52739 623 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PTENP60484 403 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 SRSF3P84103 164 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 RBM10P98175 930 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 COASYQ13057 564 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 MAPK7Q13164 816 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PNOCQ13519 176 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CUL4BQ13620 913 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 LPIN1Q14693 890 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 NR1I3Q14994 352 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CAMK4Q16566 473 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 FAM26FQ5R3K3 315 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CCDC183Q5T5S1 534 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CDCA2Q69YH5 1023 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 TWF2Q6IBS0 349 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CNNM4Q6P4Q7 775 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 NOTUMQ6P988 496 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CNKSR3Q6P9H4 555 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 FAM43BQ6ZT52 329 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 UNC13DQ70J99 1090 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 HAUS6Q7Z4H7 955 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 NOP9Q86U38 636 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 GRAMD1CQ8IYS0 662 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 SYCP3Q8IZU3 236 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 DAW1Q8N136 415 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ENGASEQ8NFI3 743 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 HVCN1Q96D96 273 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 RNPC3Q96LT9 517 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 ADPGKQ9BRR6 497 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 KIFC3Q9BVG8 833 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms